Data from: Toxin-resistant isoforms of Na+/K+-ATPase in snakes do not closely track dietary specialization on toads

Mohammadi S, Gompert Z, Gonzalez J, Takeuchi H, Mori A, Savitzky AH

Date Published: November 3, 2016

DOI: http://dx.doi.org/10.5061/dryad.4085r

 

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Title Script for stochastic character mapping
Downloaded 5 times
Description This R script was used for stochastic character mapping of the resistance mutations. It relies on phytools and data files (character states and a tree) that are included in this submission.
Download fitAnc.R (1.789 Kb)
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Title Reistance mutation character state
Downloaded 9 times
Description This matrix provides the mutation state for each snake species (NA for missing data). Resistance mutations are encoded with 1, and the non-resistant mutation with 0. The two data columns give the two mutations in order.
Download charMatrixCor.txt (109.9 Kb)
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Title Nucleotide mutation matrix
Downloaded 7 times
Description This matrix provides the mutation state for each snake species (NA for missing data), but here the two different resistance mutations (A to G vs. A to C) at codon 120 are considered separately. Specifically, resistance mutations are encoded with 1 or 2 (2 only applies to codon 120), and the non-resistant mutation with 0. The two data columns give the two mutations in order
Download charMatrixAA.txt (109.9 Kb)
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Title Phylogenetic tree
Downloaded 3 times
Description This is the tree we used for the analyses. This tree was originally published by Zhen and Weins (2016), and is simply included here to ensure our analyses can be recreated from the data on Dryad.
Download mmc3.txt (171.0 Kb)
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When using this data, please cite the original publication:

Mohammadi S, Gompert Z, Gonzalez J, Takeuchi H, Mori A, Savitzky AH (2016) Toxin-resistant isoforms of Na+/K+-ATPase in snakes do not closely track dietary specialization on toads. Proceedings of the Royal Society B 283(1842): 20162111. http://dx.doi.org/10.1098/rspb.2016.2111

Additionally, please cite the Dryad data package:

Mohammadi S, Gompert Z, Gonzalez J, Takeuchi H, Mori A, Savitzky AH (2016) Data from: Toxin-resistant isoforms of Na+/K+-ATPase in snakes do not closely track dietary specialization on toads. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.4085r
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