Data from: Phylogeographic structure, demographic history, and morph composition in a colour polymorphic lizard

McLean CA, Stuart-Fox D, Moussalli A

Date Published: July 29, 2014

DOI: http://dx.doi.org/10.5061/dryad.41n16

 

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Title Colour_Pattern_Data_File
Downloaded 35 times
Description Data from colour pattern analysis of Ctenophorus decresii male throat coloration from Mt Lofty Ranges (LR), Kangaroo Island (KI), and New South Wales (NSW) populations. ProportionGrey, ProportionRed, ProportionYellow, and ProportionBlue are colour variables, while TotalPower is a measure of overall patterning.
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Title Microsatellite_Data_File
Downloaded 41 times
Description Complete microsatellite genotypic data set.
Download Microsatellite_Data_File.xlsx (35.96 Kb)
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Title StarBEAST_Data_Files
Downloaded 5 times
Description Zip file containing nexus files for *BEAST analysis, including one mitochondrial (ND4) and five nuclear loci (BACH1, enol, FSHR, MKL1, SLC8A1). Nuclear sequences were haplotyped using PHASE.
Download StarBEAST_Data_Files.zip (27.26 Kb)
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Title STRUCTURE_Input_Files
Downloaded 30 times
Description Input files for STRUCTURE analyses. The "Microsatellite" sheet corresponds to data used in Fig. 2H of the paper, and the "Nuclear Sequence Haplotypes" sheet corresponds to data used in supplementary data Fig. S4.
Download STRUCTURE_Input_Files.xlsx (33.80 Kb)
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Title Migrate_Input_File
Downloaded 3 times
Description Input file for Migrate analyses. Data are microsatellite repeat numbers and populations are the adjacent Olary Ranges (OR) and Mt Lofty Ranges (LR) geographic regions.
Download Migrate_Input_File.TXT (4.349 Kb)
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Title MSVAR_Input_Files
Downloaded 35 times
Description Zip file containing input files for MSVAR analyses for two populations from the Southern Flinders Ranges (Aroona and Telowie Gorge), and one from each of the Olary Ranges (Bimbowrie), Mt Lofty Ranges (Morialta), and Kangaroo Island (Snake Lagoon) geographic regions.
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Title Sequence_Data_Files
Downloaded 33 times
Description Zip file containing fasta files for six loci used in this study.
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When using this data, please cite the original publication:

McLean CA, Stuart-Fox D, Moussalli A (2014) Phylogeographic structure, demographic history, and morph composition in a colour polymorphic lizard. Journal of Evolutionary Biology 27(10): 2123-2137. http://dx.doi.org/10.1111/jeb.12464

Additionally, please cite the Dryad data package:

McLean CA, Stuart-Fox D, Moussalli A (2014) Data from: Phylogeographic structure, demographic history, and morph composition in a colour polymorphic lizard. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.41n16
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