Data from: Trends in the sand: directional evolution in the shell shape of recessing scallops (Bivalvia: Pectinidae)

Sherratt E, Alejandrino A, Kraemer AC, Serb JM, Adams DC

Date Published: June 27, 2016

DOI: http://dx.doi.org/10.5061/dryad.43548

 

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Title BMTrendAnalyses R script
Downloaded 9 times
Description Phylogenetic simulation for calculating Mean Pairwise Angle to assess directional evolution in phylogenetic comparative datasets, in R.
Download BMTrendAnalyses.r (4.558 Kb)
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Title R data file
Downloaded 2 times
Description R environment file for 1000 simulated datasets under BM, and 1000 simulated datasets under BM with a trend (µ = 3).
Download mu3.RData (351.8 Mb)
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Title Shape Data
Downloaded 18 times
Description Species average Procrustes residuals (202 landmarks in 3D) for 93 species of scallops.
Download Shape.Data.csv (1.118 Mb)
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Title Phylogenetic tree
Downloaded 4 times
Description Phylogenetic tree (time calibrated) for 93 species of scallop.
Download tree.tre (3.559 Kb)
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Title Group Classifier file
Downloaded 7 times
Description Relates species names in Shape.Data to phylogenetic tree and life habits.
Download phylo.IDs.csv (5.078 Kb)
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Title R source file
Downloaded 4 times
Description Modified version of geiger's sim.char function that allows a vector of root values and modified µ.
Download sim.char2.R (3.433 Kb)
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When using this data, please cite the original publication:

Sherratt E, Alejandrino A, Kraemer AC, Serb JM, Adams DC (2016) Trends in the sand: directional evolution in the shell shape of recessing scallops (Bivalvia: Pectinidae). Evolution 70(9): 2061-2073. http://dx.doi.org/10.1111/evo.12995

Additionally, please cite the Dryad data package:

Sherratt E, Alejandrino A, Kraemer AC, Serb JM, Adams DC (2016) Data from: Trends in the sand: directional evolution in the shell shape of recessing scallops (Bivalvia: Pectinidae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.43548
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