Data from: TipDatingBeast: an R package to assist the implementation of phylogenetic tip-dating tests using BEAST

Rieux A, Khatchikian CE

Date Published: September 23, 2016

DOI: http://dx.doi.org/10.5061/dryad.43q71

 

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Title BEAST log files for Leave-one-out-cross-validation
Downloaded 142 times
Description Example BEAST log files for Leave-one-out-cross-validation analysis and additional files to plot results using the "PlotLOOCV" function using the R-package TipDatingBeast. See tutorial included in package for commands.
Download LOOCV logs.zip (11.39 Mb)
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Title Example BEAST log files for Date-randomized test
Downloaded 15 times
Description Example BEAST log files for Date-randomized test to plot results using the "PlotDRT" function using the R-package TipDatingBeast. See tutorial included in package for commands.
Download DRT_logs.zip (5.746 Mb)
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Title Example datafile for BEAST 1
Downloaded 6 times
Description Example datafile for BEAST 1 used to produce the log files deposited here.
Download Flu_BEAST_18.xml (56.25 Kb)
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Title Example datafile for BEAST 2
Downloaded 5 times
Description Example datafile for BEAST 2 used to produce the log files deposited here.
Download Flu_BEAST_232.xml (53.60 Kb)
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When using this data, please cite the original publication:

Rieux A, Khatchikian CE (2017) TipDatingBeast: an R package to assist the implementation of phylogenetic tip-dating tests using BEAST. Molecular Ecology Resources 17(4): 608-613. http://dx.doi.org/10.1111/1755-0998.12603

Additionally, please cite the Dryad data package:

Rieux A, Khatchikian CE (2016) Data from: TipDatingBeast: an R package to assist the implementation of phylogenetic tip-dating tests using BEAST. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.43q71
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