Data from: Sea-level driven glacial-age refugia and post-glacial mixing on subtropical coasts, a palaeohabitat and genetic study

Dolby GA, Hechinger R, Ellingson RA, Findley LT, Lorda J, Jacobs DK

Date Published: November 4, 2016

DOI: http://dx.doi.org/10.5061/dryad.46092

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title PRSB_qyc_forDIYABC_3pops
Downloaded 6 times
Description input data file for DIYABC v. 2 for Quietula y-cauda
Download PRSB_qyc_forDIYABC_3pops.mss (5.857 Kb)
Details View File Details
Title PRSB_fpa_forDIYABC_3pops_withoutFMA8,15
Downloaded 3 times
Description input data file for DIYABC for Fundulus parvipinnis
Download PRSB_fpa_forDIYABC_3pops_withoutFMA8,15.mss (10.90 Kb)
Details View File Details
Title PRSB_gmi_forDIYABC_3pops
Downloaded 1 time
Description input data file for DIYABC for Gillichthys mirabilis
Download PRSB_gmi_forDIYABC_3pops.mss (12.29 Kb)
Details View File Details
Title Microsatellite allele copy number data
Downloaded 2 times
Description allele copy number data for all 3 species used for the genetic Discriminant Function Analysis ('genetic DFA). Microsatellite fragment lengths are alleles, and individuals can have 0 copies of an allele, 1 copy of an allele (heterozygous) or 2 copies of an allele (homozygous).
Download Microsatellite presence-absence data for D....xlsx (145.5 Kb)
Details View File Details
Title forTraining_ModernPolygonAttributes
Downloaded 1 time
Description Habitat attribute data (based on polygons meeting slope/bathymetry requirements in ArcGIS) for the modern (0 +/- 5 mbpsl) depth bin. These data were used to train the discriminant function analysis ('habitat DFA') to identify variables that predict presence (yes) or absence (no) of our focal species.
Download forTraining_ModernPolygonAttributes.csv (420 bytes)
Details View File Details
Title Habitat Attribute Data
Description Polygon attribute data on which the DFA and GLMs were performed to assess the habitat models.
Download AreaPerTime26Aug2015_prsb.csv (3.36 Kb)
Details View File Details
Title FMA28Apr2013_CONVERT_5Feb2014_STRUCTURE
Downloaded 4 times
Description Microsatellite data in input file for STRUCTURE for Fundulus parvipinnis
Download FMA28Apr2013_CONVERT_5Feb2014_STRUCTURE.str (18.28 Kb)
Details View File Details
Title GMA_30July2013_CONVERT_pac5Feb2014_STRUCTURE
Downloaded 1 time
Description Microsatellite data in STRUCTURE format for Gillichthys mirabilis
Download GMA_30July2013_CONVERT_pac5Feb2014_STRUCTURE.str (14.87 Kb)
Details View File Details
Title QMA_26August2013_PACb_CONVERT_5Feb2014_STRUCTURE
Downloaded 1 time
Description Microsatellite data in STRUCTURE format for Quietula y-cauda
Download QMA_26August2013_PACb_CONVERT_5Feb2014_ST...RE.str (9.297 Kb)
Details View File Details

When using this data, please cite the original publication:

Dolby GA, Hechinger R, Ellingson RA, Findley LT, Lorda J, Jacobs DK (2016) Sea-level driven glacial-age refugia and post-glacial mixing on subtropical coasts, a palaeohabitat and genetic study. Proceedings of the Royal Society B 283(1843): 20161571. http://dx.doi.org/10.1098/rspb.2016.1571

Additionally, please cite the Dryad data package:

Dolby GA, Hechinger R, Ellingson RA, Findley LT, Lorda J, Jacobs DK (2016) Data from: Sea-level driven glacial-age refugia and post-glacial mixing on subtropical coasts, a palaeohabitat and genetic study. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.46092
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: