Data from: Phylogenomics using target-restricted assembly resolves intra-generic relationships of parasitic lice (Phthiraptera: Columbicola)

Boyd BM, Allen JM, Nguyen N, Sweet AD, Warnow T, Shapiro MD, Villa SM, Bush SE, Clayton DH, Johnson KP

Date Published: March 22, 2017

DOI: http://dx.doi.org/10.5061/dryad.4812p

 

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Title Table S1.
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Description Collection, identification, and sequencing data.
Download Columbicola_MS_TableS1_Sarah.xlsx (79.49 Kb)
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Title Supplementary Text and Fig S1
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Description This file includes additional details on DNA extraction methods, commands used in phylogenetic analysis, and figure S1.
Download Boyd_Syst_Biol_Supplementary_Materials_VS6.pdf (157.1 Kb)
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Title Trees, Alignment Matrix, Partitions
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Description This file contains all of the phylogenetic data associated with this Systematic Biology submission. This includes, taxon list, phylogenetic trees (RAxML, ASTRAL, and ASTRID), DNA alignment matrix, Data partitions (sets for RAxML analysis and ordering of genes in the matrix).
Download Boyd.SystBiol.Trees.Matrix.Sets.tgz (22.88 Mb)
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When using this data, please cite the original publication:

Boyd BM, Allen JM, Nguyen N, Sweet AD, Warnow T, Shapiro MD, Villa SM, Bush SE, Clayton DH, Johnson KP (2017) Phylogenomics using target-restricted assembly resolves intra-generic relationships of parasitic lice (Phthiraptera: Columbicola). Systematic Biology, online in advance of print. http://dx.doi.org/10.1093/sysbio/syx027

Additionally, please cite the Dryad data package:

Boyd BM, Allen JM, Nguyen N, Sweet AD, Warnow T, Shapiro MD, Villa SM, Bush SE, Clayton DH, Johnson KP (2017) Data from: Phylogenomics using target-restricted assembly resolves intra-generic relationships of parasitic lice (Phthiraptera: Columbicola). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.4812p
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