Data from: Non-equilibrium dynamics and floral trait interactions shape extant angiosperm diversity

O'Meara BC, Smith SD, Armbruster WS, Harder LD, Hardy CR, Hileman LC, Hufford L, Litt A, Magallon S, Smith SA, Stevens PF, Fenster CB, Diggle PK

Date Published: April 12, 2016

DOI: http://dx.doi.org/10.5061/dryad.486c0

 

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Title Summary files for testing sims
Downloaded 9 times
Description This includes the summary files from the simulations used to test faMUSSE.
Download FloralFilesForDryad.zip (57.05 Mb)
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Title Scripts
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Description These are the R scripts for doing all the analyses in the paper. Note that we include a copy of diversitree with slight modifications (look for BCO in the code).
Download Scripts.zip (88.91 Mb)
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Title Performance check results
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Description These files are the result of simulations followed by pruning and analyses to test the new approach. The only modification was to remove (for space concerns) the files associated with batching each of the many jobs.
Download PerformanceCheck_May2015_forDryad.zip (260.1 Mb)
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Title Forward in time simulations
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Description These are the output of doing simulations forward in time to predict floral evolution.
Download SimsMay2013FINAL.zip (13.42 Mb)
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Title Main analysis: source data
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Description The data used in the main analysis of floral evolution.
Download SourceData.zip (31.10 Kb)
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Title Main analysis: summaries
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Description Summaries of rates, likelihoods, and AIC values for the over 19K models analyzed.
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Title Main analysis: analyses under transition model 1
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Description The models were broken up by transition model, then diversification model, then focal area.
Download T1.zip (379.7 Mb)
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Title Main analysis: analyses under transition model 2
Downloaded 5 times
Description The models were broken up by transition model, then diversification model, then focal area.
Download T2.zip (382.6 Mb)
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Title Main analysis: analyses under transition model 3
Downloaded 7 times
Description The models were broken up by transition model, then diversification model, then focal area.
Download T3.zip (384.4 Mb)
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Title Main analysis: analyses under transition model 4
Downloaded 3 times
Description The models were broken up by transition model, then diversification model, then focal area.
Download T4.zip (389.1 Mb)
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Title Main analysis: analyses under transition model 5
Downloaded 4 times
Description The models were broken up by transition model, then diversification model, then focal area.
Download T5.zip (326.9 Mb)
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When using this data, please cite the original publication:

O'Meara BC, Smith SD, Armbruster WS, Harder LD, Hardy CR, Hileman LC, Hufford L, Litt A, Magallon S, Smith SA, Stevens PF, Fenster CB, Diggle PK (2016) Non-equilibrium dynamics and floral trait interactions shape extant angiosperm diversity. Proceedings of the Royal Society B 283(1830): 20152304. http://dx.doi.org/10.1098/rspb.2015.2304

Additionally, please cite the Dryad data package:

O'Meara BC, Smith SD, Armbruster WS, Harder LD, Hardy CR, Hileman LC, Hufford L, Litt A, Magallon S, Smith SA, Stevens PF, Fenster CB, Diggle PK (2016) Data from: Non-equilibrium dynamics and floral trait interactions shape extant angiosperm diversity. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.486c0
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