Data from: Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: a case-study in Carex sect. Racemosae

Massatti R, Reznicek AA, Knowles LL

Date Published: February 8, 2016

DOI: http://dx.doi.org/10.5061/dryad.4b8j7

 

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Title Parameters for Pyrad
Description This file contains the Pyrad parameters file that was used to create the SNP dataset that was used (after modification) in ML and SVDquartets analyses.
Download params_pyrad_racemosae.txt (3.598 Kb)
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Title Data file for ML analyses
Downloaded 1 time
Description This file contains the SNP data used for the ML analysis. A key to species codes is given in a separate file.
Download racemosae_ML.txt (596.7 Kb)
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Title Data file for SVDquartets analysis
Description This file contains the SNP data for the SVDquartets analysis. A separate file contains the codes for the species names.
Download racemosae_SVDquartets.txt (1.623 Mb)
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Title Species key, ML analysis
Downloaded 1 time
Description This file provides the species names and codes that are used in the ML data file.
Download species_key_ML_analysis.txt (799 bytes)
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Title Species key for SVDquartets analysis
Description This file contains the species and codes that are used in the SVDquartets data file.
Download species_key_SVDquartets_analysis.txt (669 bytes)
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When using this data, please cite the original publication:

Massatti R, Reznicek AA, Knowles LL (2016) Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: a case-study in Carex sect. Racemosae. American Journal of Botany 103(2): 337-347. http://dx.doi.org/10.3732/ajb.1500315

Additionally, please cite the Dryad data package:

Massatti R, Reznicek AA, Knowles LL (2016) Data from: Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: a case-study in Carex sect. Racemosae. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.4b8j7
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