Data from: Transcriptional regulation of fruit ripening by tomato FRUITFULL homologs and associated MADS-box proteins

Fujisawa M, Shima Y, Nakagawa H, Kitagawa M, Kimbara J, Nakano T, Kasumi T, Ito Y

Date Published: March 27, 2014

DOI: http://dx.doi.org/10.5061/dryad.4f7n5

 

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Title tpc119453_Supplemental Data Set 1
Downloaded 65 times
Description Supplemental Data Set 1. RNA-Seq analysis of FUL1/FUL2 suppressed and rin mutant tomato fruits.
Download tpc119453_Supplemental Data Set 1.xlsx (15.06 Mb)
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Title tpc119453_Supplemental Data Set 2
Downloaded 80 times
Description Supplemental Data Set 2. A list of DEGs in (A) the FUL1/FUL2 suppressed fruits, (B) the wild type ripening fruits and (C) the rin mutant fruits with MIPS annotation.
Download tpc119453_Supplemental Data Set 2.xlsx (6.055 Mb)
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Title tpc119453_Supplemental Data Set 3
Downloaded 40 times
Description Supplemental Data Set 3. MIPS categories significantly overrepresented in the sets of DEGs for FUL and rin.
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Title tpc119453_Supplemental Data Set 4
Downloaded 50 times
Description Supplemental Data Set 4. Binding regions of (A) FUL1, (B) FUL2 and (C) RIN detected by ChIP-chip and CArG boxes in the regions in this study.
Download tpc119453_Supplemental Data Set 4.xlsx (1.024 Mb)
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Title tpc119453_Supplemental Data Set 5
Downloaded 55 times
Description Supplemental Data Set 5. A list of direct target genes of (A) FUL1, (B) FUL2 and (C) RIN target genes identified in this study.
Download tpc119453_Supplemental Data Set 5.xlsx (348.6 Kb)
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Title tpc119453_Supplemental Data Set 6
Downloaded 51 times
Description Supplemental Data Set 6. Functional annotation of direct target genes of (A) FUL1, (B) FUL2 and (C) RIN target genes.
Download tpc119453_Supplemental Data Set 6.xlsx (915.4 Kb)
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When using this data, please cite the original publication:

Fujisawa M, Shima Y, Nakagawa H, Kitagawa M, Kimbara J, Nakano T, Kasumi T, Ito Y (2014) Transcriptional regulation of fruit ripening by tomato FRUITFULL homologs and associated MADS-box proteins. The Plant Cell 26(1): 89-101. http://dx.doi.org/10.1105/tpc.113.119453

Additionally, please cite the Dryad data package:

Fujisawa M, Shima Y, Nakagawa H, Kitagawa M, Kimbara J, Nakano T, Kasumi T, Ito Y (2014) Data from: Transcriptional regulation of fruit ripening by tomato FRUITFULL homologs and associated MADS-box proteins. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.4f7n5
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