Data from: When sensing is gambling: an experimental system reveals how plasticity can generate tunable bet-hedging strategies

Maxwell CS, Magwene PM

Date Published: January 23, 2017

DOI: http://dx.doi.org/10.5061/dryad.4f8c0

 

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Title JPEGs of scans of plate images for Figures 2 and 6
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Description These are JPEG files of the original TIFF files used to produce Figs. 2 and 6. Note that Figure 2 was produced from replicate 1 and Figure 6B was produced with files from replicate 2. See README for metadata.
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Title Code used in the analysis of the data
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Description R code files used to process the raw data to generate the data files in this submission as well as the code used to generate figures and datasets used for the statistics. These files must be in the same directory as the CSV files in this submission in order to run. HTML links in the README file to R code will also only work if these files are in the same folder as the HTML file.
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Title 2017-Maxwell-Magwene-when-sensing-is-gambling-fig3
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Description This is a file that gives the data used to generate Figure 3. The goal of this set of experiments was to determine the ability of different genotypes to grow in SC+5FOA and SC-ura media in different concentrations of estradiol. Each culture was measured at the beginning and end of a 24hr growth period. This file was generated by process-tradeoffs-fig3.R.
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Title 2017-Maxwell-Magwene-when-sensing-is-gambling-fig4
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Description This is a file that gives the data used to generate Figure 4. The goal of this set of experiments was to determine if strain that was plastic to the concentration of estradiol was pursuing a bet-hedging strategy in an environment with estradiol gradients and that alternated between SC-ura and SC+5FOA selection. This file was generated by process-competitions-fig4.R.
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Title 2017-Maxwell-Magwene-when-sensing-is-gambling-fig5-and-figS2
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Description This is a file that gives the data used to generate Figure 5 and Supplementary Figure 2. The goal of this experiment was to determine if the plastic strain had a lower fitness than specialist strains. This file was generated by process-liquid-competitions-fig5.R.
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Title 2017-Maxwell-Magwene-when-sensing-is-gambling-fig6
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Description This is a file that gives the data used to generate Figure 6. The goal of this experiment was to determine if mutation altered the diversification strategies of the plastic strain. This file was generated by process-images-fig6.R, which collates the cropped image data into a csv file.
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Title 2017-Maxwell-Magwene-when-sensing-is-gambling-figS1a
Downloaded 2 times
Description These data are optical density readings for cultures of yeast grown in different concentrations of SC+5FOA media and different concentrations of estradiol. The goal was to determine which degron tag on URA3 would allow for conditional growth on both SC-ura and SC+5FOA. This file was generated by process-degron-tag-figS1.R.
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Title 2017-Maxwell-Magwene-when-sensing-is-gambling-figS1b
Downloaded 2 times
Description These data are optical density readings for cultures of yeast grown in SC-ura media and different concentrations of estradiol. The goal was to determine which degron tag on URA3 would allow for conditional growth on both SC-ura and SC+5FOA. This file was generated by process-degron-tag-figS1.R.
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Title README in org-mode format
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Description README.html was exported from org-mode format. Code embedded in this document can be executed natively using emacs. For code blocks to run and for links to work, all data in this submission, and all R files in the R-code folder should be placed in the same directory.
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When using this data, please cite the original publication:

Maxwell CS, Magwene PM (2017) When sensing is gambling: an experimental system reveals how plasticity can generate tunable bet-hedging strategies. Evolution 71(4): 859–871. http://dx.doi.org/10.1111/evo.13199

Additionally, please cite the Dryad data package:

Maxwell CS, Magwene PM (2017) Data from: When sensing is gambling: an experimental system reveals how plasticity can generate tunable bet-hedging strategies. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.4f8c0
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