Data from: Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility

Porter TM, Golding GB, King C, Froese D, Zazula G, Poinar HN

Date Published: April 26, 2013

DOI: http://dx.doi.org/10.5061/dryad.4m7d1

 

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Title DRYAD_dataflow
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Description Excel spreadsheet showing a sample dataflow.
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Title finalOTUseeds
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Description Fasta formatted text files with the seed sequence for each OTU used in the study.
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Title perlScripts
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Description Perl scripts used in the study.
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Title readidLineageMap
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Description Tab delimited text files containing the readID for each OTU seed, taxonomic lineage, and OTU abundance.
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Title barcodePrimerFiles
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Description Text files containing the barcodes and primers used in the study.
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Title Rscripts
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Description [R] scripts used in the study.
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When using this data, please cite the original publication:

Porter TM, Golding GB, King C, Froese D, Zazula G, Poinar HN (2013) Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility. Molecular Ecology Resources 13(5): 798–810. http://dx.doi.org/10.1111/1755-0998.12124

Additionally, please cite the Dryad data package:

Porter TM, Golding GB, King C, Froese D, Zazula G, Poinar HN (2013) Data from: Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.4m7d1
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