Data from: Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill

 

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Title Bik_etal_PLoSOne
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Description "Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill" This Dryad data packet contains: Raw Data Files - Pooled from 3 independent 454 Runs (GS FLX Titanium; 2 full plates, plus one 1/16 plate). Clustered OTU data - Raw data was demultiplexed and quality filtered in both the QIIME and OCTUPUS pipelines, and subsequently clustered at 99% pairwise sequence identity (two independent clustering runs carried out in uclust in QIIME and the octu.pl script in OCTUPUS). Taxonomy assignments - carried out using the Megablast algorithm against GenBank's non-redundant nucleotide database in Summer 2011. Alpha and beta diversity analyses (raw outputs with log files) - carried out in the QIIME pipeline.
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When using this data, please cite the original publication:

Bik HM, Halanych KM, Sharma J, Thomas WK (2012) Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill. PLoS ONE 7(6): e38550. http://dx.doi.org/10.1371/journal.pone.0038550

Additionally, please cite the Dryad data package:

Bik HM, Halanych KM, Sharma J, Thomas WK (2012) Data from: Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.4sd51d4b
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