Data from: Systems biology of tissue-specific response to Anaplasma phagocytophilum reveals differentiated apoptosis in the tick vector Ixodes scapularis

Ayllón N, Villar M, Galindo RC, Kocan KM, Sima R, López JA, Vázquez J, Alberdi P, Cabezas-Cruz A, Kopáček P, de la Fuente J

Date Published: April 2, 2015

DOI: http://dx.doi.org/10.5061/dryad.50kt0

 

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Title File nymphs_replica 1.raw.zip
Downloaded 9 times
Description This file contains the mass spectrometry data of iTRAQ labeled nymph sample (A. phagocytophilum-infected and uninfected control) replicate 1 (RAW.ZIP). Files may be viewed with Thermo Scientific Qual Browser.
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Title File nymphs_replica 2.raw.zip
Downloaded 8 times
Description This file contains the mass spectrometry data of iTRAQ labeled nymph sample (A. phagocytophilum-infected and uninfected control) replicate 2 (RAW.ZIP). Files may be viewed with Thermo Scientific Qual Browser.
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Title File tissues_ replica 1.raw.zip
Downloaded 7 times
Description This file contains the mass spectrometry data of iTRAQ labeled adult female gut and salivary gland sample (A. phagocytophilum-infected and uninfected control) replicate 1 (RAW.ZIP). Files may be viewed with Thermo Scientific Qual Browser.
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Title File tissues_ replica 2.raw.zip
Downloaded 2 times
Description This file contains the mass spectrometry data of iTRAQ labeled adult female gut and salivary gland sample (A. phagocytophilum-infected and uninfected control) replicate 2 (RAW.ZIP). Files may be viewed with Thermo Scientific Qual Browser.
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Title Folder RNAseq analysis
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Description This folder contains RNAseq data analysis for A. phagocytophilum-infected and uninfected nymphs, guts and salivary glands samples replicates 1 and 2.
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Title File Sample_Tissues_Ixo_all_samples.fastq.zip
Downloaded 6 times
Description This file contains the reads from I. scapularis adult female tissue samples replicates 1 and 2 (FASTQ.ZIP).
Download Sample_Tissues_Ixo_all_samples.fastq.zip (1.806 Gb)
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Title File Sample_Nymphs_Ixo_all_samples.fastq.zip
Downloaded 7 times
Description This file contains the reads from I. scapularis nymph samples replicates 1 and 2 (FASTQ.ZIP).
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When using this data, please cite the original publication:

Ayllón N, Villar M, Galindo RC, Kocan KM, Sima R, López JA, Vázquez J, Alberdi P, Cabezas-Cruz A, Kopáček P, de la Fuente J (2015) Systems biology of tissue-specific response to Anaplasma phagocytophilum reveals differentiated apoptosis in the tick vector Ixodes scapularis. PLoS Genetics 11(3): e1005120. http://dx.doi.org/10.1371/journal.pgen.1005120

Additionally, please cite the Dryad data package:

Ayllón N, Villar M, Galindo RC, Kocan KM, Sima R, López JA, Vázquez J, Alberdi P, Cabezas-Cruz A, Kopáček P, de la Fuente J (2015) Data from: Systems biology of tissue-specific response to Anaplasma phagocytophilum reveals differentiated apoptosis in the tick vector Ixodes scapularis. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.50kt0
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