Data from: Kinship, inbreeding, and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise

Yuan ML, Dean SH, Longo Berrios AV, Rothermel BB, Tuberville TD, Zamudio KR

Date Published: April 1, 2015

DOI: http://dx.doi.org/10.5061/dryad.54bm8

 

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Title Map File
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Description See ReadMe file
Download Yuan_GT_mapfile.txt (16.15 Kb)
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Title Microsatellite genotypes
Downloaded 16 times
Description Microsatellite genotypes for all samples (focal and reference) across 21 loci. Each individual is represented by a single row. Unknown alleles are denoted by zero (0). Genotype calls generated and confirmed using GeneMarker (SoftGenetics).
Download GP_genotyping_datamastersheet-1.xls (88.57 Kb)
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Title Sample UTM coordinates
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Description GPS coordinates are provided in the Universal Transverse Mercator (UTM) coordinate system for UTM zone 17N.
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Title OTU Tables
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Description QIIME generated OTU tables (.biom format) used in this study. See ReadMe file for further information.
Download Otu_tables.zip (4.395 Mb)
Download README.txt (634 bytes)
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Title Gutmicrobiomes_16SV4
Downloaded 28 times
Description Raw sequence and barcode files from MiSeq.
Download GutMicrobiome_16SV4.tar.gz (8.616 Gb)
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When using this data, please cite the original publication:

Yuan ML, Dean SH, Longo Berrios AV, Rothermel BB, Tuberville TD, Zamudio KR (2015) Kinship, inbreeding, and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise. Molecular Ecology 24(10): 2521-2536. http://dx.doi.org/10.1111/mec.13169

Additionally, please cite the Dryad data package:

Yuan ML, Dean SH, Longo Berrios AV, Rothermel BB, Tuberville TD, Zamudio KR (2015) Data from: Kinship, inbreeding, and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.54bm8
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