Data from: Repeated land mass reformation limits diversification in the widespread littoral zone mosquito Anopheles sundaicus sensu lato in the Indo-Oriental Region

Zarowiecki M, Linton Y, Post RJ, Bangs MJ, Htun PT, Hlaing T, Seng CM, Baimai V, Ding TH, Sochantha T, Walton C

Date Published: April 18, 2014

DOI: http://dx.doi.org/10.5061/dryad.55qg0

 

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Title Population genetic dataset Anopheles sundaicus CO1 alignment
Downloaded 12 times
Description DNA alignment of a fragment of mitochondrial CO1/cox1 gene from Anopheles sundaicus s.l. Individual haplotypes are submitted to GenBank accession numbers GQ395814-GQ395927 and details for each specimen are given in publication Supplementary table S1.
Download sun_CO1_gb.fas (79.29 Kb)
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Title Population genetic dataset Anopheles sundaicus ITS2 alignment
Downloaded 8 times
Description DNA alignment of a fragment of ITS2 (ribosomal internal transcribed spacer 2) from Anopheles sundaicus s.l. used for biogeographical study. Individual haplotypes are submitted to GenBank Popset number 261599508 and details for each specimen are given in publication Supplementary table S1.
Download GenBank_ITS2_sundaicus.fas (5.094 Kb)
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Title Population genetic dataset Anopheles sundaicus Mpi alignment
Downloaded 3 times
Description DNA alignment of a fragment of Mpi (mannose phosphatase isomerase) gene from Anopheles sundaicus s.l. used for biogeographical study. Individual haplotypes are submitted to GenBank Popset number 262386140 and details for each specimen are given in publication Supplementary table S1.
Download mpi_geo_GenBank.nex (1.336 Mb)
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Title Population genetic dataset Anopheles sundaicus Mpi long alignment
Downloaded 4 times
Description DNA alignment of a fragment of Mpi (mannose phosphatase isomerase) gene from Anopheles sundaicus s.l. used for ecological study. Individual haplotypes are submitted to GenBank Popset number 261599516 and details for each specimen are given in publication Supplementary table S1.
Download mpifb_aligngambiae.nex (133.2 Kb)
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Title CO1_MSN
Downloaded 3 times
Description Minimum spanning network created using Arlequin.
Download CO1_MSN.out (9.944 Kb)
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Title Arl_MSN
Downloaded 4 times
Description Minimum spanning network created using the software Arlequin.
Download Arl_MSN.out (10.68 Kb)
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Title Arlequin input file of the Mpi dataset
Downloaded 4 times
Description Arlequin input file of the Mpi dataset. Haplotypes for all individual reported separately.
Download Arl.arp (315.6 Kb)
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Title Arlequin input file of the CO1 dataset.
Downloaded 6 times
Description Arlequin input file of the CO1 dataset. Haplotypes for all individual reported separately.
Download CO1.arp (171.1 Kb)
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When using this data, please cite the original publication:

Zarowiecki M, Linton Y, Post RJ, Bangs MJ, Htun PT, Hlaing T, Seng CM, Baimai V, Ding TH, Sochantha T, Walton C (2014) Repeated land mass reformation limits diversification in the widespread littoral zone mosquito Anopheles sundaicus sensu lato in the Indo-Oriental Region. Molecular Ecology 23(10): 2573-2589. http://dx.doi.org/10.1111/mec.12761

Additionally, please cite the Dryad data package:

Zarowiecki M, Linton Y, Post RJ, Bangs MJ, Htun PT, Hlaing T, Seng CM, Baimai V, Ding TH, Sochantha T, Walton C (2014) Data from: Repeated land mass reformation limits diversification in the widespread littoral zone mosquito Anopheles sundaicus sensu lato in the Indo-Oriental Region. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.55qg0
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