Data from: Influence of the larval phase on connectivity: strong differences in the genetic structure of brooders and broadcasters in the Ophioderma longicauda species complex

Weber AA, Mérigot B, Valière S, Chenuil A

Date Published: November 5, 2015

DOI: http://dx.doi.org/10.5061/dryad.5ks03

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title fasta alignments: 11 genetic markers
Downloaded 11 times
Description This folder contains the fasta alignments of the 11 genetic markers used in this study, for the Ophioderma longicauda clusters C3, C5 and C6. The sequences were obtained using Miseq sequencing.
Download alignments_11_markers.zip (48.96 Kb)
Details View File Details
Title raw_miseq_data_1
Downloaded 11 times
Description this folder contains the raw Miseq data for the wells A1 to B10 (two fastq files per well, read 1 and read 2). each well corresponds to 3 individuals, for which 38 markers were amplified
Download raw_miseq_data_1.zip (941.6 Mb)
Details View File Details
Title raw_miseq_data_2
Downloaded 8 times
Description this folder contains the raw Miseq data for the wells B11 to D9 (two fastq files per well, read 1 and read 2). each well corresponds to 3 individuals, for which 38 markers were amplified
Download raw_miseq_data_2.zip (998.1 Mb)
Details View File Details
Title raw_miseq_data_3
Downloaded 9 times
Description this folder contains the raw Miseq data for the wells D10 to F11 (two fastq files per well, read 1 and read 2). each well corresponds to 3 individuals, for which 38 markers were amplified
Download raw_miseq_data_3.zip (994.0 Mb)
Details View File Details
Title raw_miseq_data_4
Downloaded 10 times
Description this folder contains the raw Miseq data for the wells F12 to H12 (two fastq files per well, read 1 and read 2). each well corresponds to 3 individuals, for which 38 markers were amplified
Download raw_miseq_data_4.zip (952.8 Mb)
Details View File Details
Title sample sheet - individuals and position on the plate
Downloaded 11 times
Description this excel file shows the pooling of PCR amplicons (38 markers used) for 288 individuals in a 96-well plate. In each well, the amplicons of three individuals were pooled. Each well was sequenced using a Miseq sequencer.
Download individual_names_and_position.xlsx (50.39 Kb)
Details View File Details

When using this data, please cite the original publication:

Weber AA, Mérigot B, Valière S, Chenuil A (2015) Influence of the larval phase on connectivity: strong differences in the genetic structure of brooders and broadcasters in the Ophioderma longicauda species complex. Molecular Ecology 24(24): 6080–6094. http://dx.doi.org/10.1111/mec.13456

Additionally, please cite the Dryad data package:

Weber AA, Mérigot B, Valière S, Chenuil A (2015) Data from: Influence of the larval phase on connectivity: strong differences in the genetic structure of brooders and broadcasters in the Ophioderma longicauda species complex. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.5ks03
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: