Data from: Homologous sex chromosomes in three deeply divergent anuran species

 

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Title Hyla_genotypes
Downloaded 22 times
Description Genotypes of parents and offspring for crosses used to infer sex linkage. File contains 6 descriptive columns plus 2 per marker, and one row per individual. Missing data value: empty cell. species: Species cross: Collective identifier for 2 parents and their offspring indiv: Unique identifier for an individual stage: Adult, juvenile, or tadpole sex: Sex, observed or inferred from microsatellites sexed_by: Sex established by phenotype for adults, microsatellites for tadpoles, dissection for juveniles [marker name].1: One of two alleles for a given marker. For microsatellites, number corresponds to fragment length. For PCR-RFLP markers, 0 or 1 for absence/presence of restriction site. For sequence markers, balearicus or siculus haplotype. [marker name].2: Second of two alleles for the marker.
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Title Bufo_genotypes
Downloaded 16 times
Description Genotypes of parents and offspring for backcross used to infer sex linkage. Each file contains 6 descriptive columns plus 2 per marker, and one row per individual. Missing data value: empty cell. species: Species cross: Collective identifier for 2 parents and their offspring indiv: Unique identifier for an individual stage: Adult, juvenile, or tadpole sex: Sex, observed or inferred from microsatellites sexed_by: Sex established by phenotype for adults, microsatellites for tadpoles, dissection for juveniles [marker name].1: One of two alleles for a given marker. For microsatellites, number corresponds to fragment length. For PCR-RFLP markers, 0 or 1 for absence/presence of restriction site. For sequence markers, balearicus or siculus haplotype. [marker name].2: Second of two alleles for the marker.
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Title Rana_genotypes
Downloaded 16 times
Description Genotypes of parents and offspring for crosses used to infer sex linkage. Each file contains 6 descriptive columns plus 2 per marker, and one row per individual. Missing data value: empty cell. species: Species cross: Collective identifier for 2 parents and their offspring indiv: Unique identifier for an individual stage: Adult, juvenile, or tadpole sex: Sex, observed or inferred from microsatellites sexed_by: Sex established by phenotype for adults, microsatellites for tadpoles, dissection for juveniles [marker name].1: One of two alleles for a given marker. For microsatellites, number corresponds to fragment length. For PCR-RFLP markers, 0 or 1 for absence/presence of restriction site. For sequence markers, balearicus or siculus haplotype. [marker name].2: Second of two alleles for the marker.
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Title Hyla arborea transcriptome
Downloaded 39 times
Description Adult male H. arborea transcriptome, from brain, eye, heart, liver, muscle, and testis. 2.2 Gbp raw reads assembled with Trinity. When multiple splice variants assembled, only longest retained. Scaffolded with SSPACE. Scaffolds corresponding to genes or gene fragments used in this study: CHD1: scaffold12406 ARL8A: scaffold8654 CHERP: scaffold390 CSDE1: scaffold1308 DMRT1: scaffold6154 DOCK8: scaffold31469 FRYL: scaffold80 KIAA0232: scaffold192 LOC100494802: scaffold13879 MAP1B: scaffold574 MTUS1: scaffold1029 NDRG2: scaffold355 RAD23B: scaffold2417 WDR1: scaffold1232
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When using this data, please cite the original publication:

Brelsford A, Stöck M, Betto-Colliard C, Dubey S, Dufresnes C, Jourdan-Pineau H, Rodrigues N, Savary R, Sermier R, Perrin N (2013) Homologous sex chromosomes in three deeply divergent anuran species. Evolution 67(8): 2434-2440. http://dx.doi.org/10.1111/evo.12151

Additionally, please cite the Dryad data package:

Brelsford A, Stöck M, Betto-Colliard C, Dubey S, Dufresnes C, Jourdan-Pineau H, Rodrigues N, Savary R, Sermier R, Perrin N (2013) Data from: Homologous sex chromosomes in three deeply divergent anuran species. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.5nt3g
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