Data from: A new model for ancient DNA decay based on paleogenomic meta-analysis

Kistler L, Ware R, Smith O, Collins M, Allaby RG

Date Published: May 11, 2017

DOI: http://dx.doi.org/10.5061/dryad.5r10j

 

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Title Fragment length tables
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Description Fragment length frequency tables from genomic read alignments, n=185.
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Title mapDamage results
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Description Results (all output files) of mapDamage analyses, n=185 samples.
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Title Lambda estimation
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Description Results and plots of fragment length distribution (lambda) estimation, n=185 datasets.
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Title Kmer summary statistics tables
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Description Kmer base-stacking energy, Shannon entropy, and genomic enrichment for all datasets (n=185)
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Title Histone periodicity estimation
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Description Plots and results of histone periodicity estimation in datasets yielding significant estimates, n=112.
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Title Scripts and expedient code
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Description Custom scripts and expedient code used in analyses.
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Title README
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Description Summary of repository contents.
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When using this data, please cite the original publication:

Kistler L, Ware R, Smith O, Collins M, Allaby RG (2017) A new model for ancient DNA decay based on paleogenomic meta-analysis. Nucleic Acids Research 45(11): 6310-6320. http://dx.doi.org/10.1093/nar/gkx361

Additionally, please cite the Dryad data package:

Kistler L, Ware R, Smith O, Collins M, Allaby RG (2017) Data from: A new model for ancient DNA decay based on paleogenomic meta-analysis. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.5r10j
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