Data from: Detecting genomic signatures of natural selection with principal component analysis: application to the 1000 Genomes data

Duforet-Frebourg N, Laval G, Bazin E, Blum MGB, Luu K

Date Published: January 5, 2016

DOI: http://dx.doi.org/10.5061/dryad.5s77q

 

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Title loadings_1000G.txt
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Description Loadings of SNPs from the 1000 genomes data (phase 1, 36,536,154 SNPs). Each loading corresponds to the correlation between a principal component and a SNP. A principal component analysis with K=2 was performed. maf stands for minor allele frequency.
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When using this data, please cite the original publication:

Duforet-Frebourg N, Luu K, Laval G, Bazin E, Blum MGB (2016) Detecting genomic signatures of natural selection with principal component analysis: application to the 1000 Genomes data. Molecular Biology and Evolution 33(4): 1082-1093. http://dx.doi.org/10.1093/molbev/msv334

Additionally, please cite the Dryad data package:

Duforet-Frebourg N, Laval G, Bazin E, Blum MGB, Luu K (2015) Data from: Detecting genomic signatures of natural selection with principal component analysis: application to the 1000 Genomes data. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.5s77q
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