Data from: Multilocus phylogenetic analyses of Hispaniolan and Bahamian trunk anoles (distichus species group)

Geneva AJ, Hilton J, Noll S, Glor RE

Date Published: April 30, 2015

DOI: http://dx.doi.org/10.5061/dryad.622h6

 

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Title distichus species group DNA alignment
Downloaded 19 times
Description Concatenated multilocus DNA sequence alignment of the distichus species group and outgroups. Alignment consists of 58 taxa and eight genes - seven nuclear loci (RAG1, R35, BDNF, NT3, B108, B127, and GJA) and one mitochondrial locus (ND2). File includes mrbayes block used for analysis.
Download concatenated_by_gene.nex (323.9 Kb)
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Title *BEAST posterior distribution of trees
Downloaded 6 times
Description Posterior distribution of phylogenetic trees estimated using the coalescent species tree software *BEAST (v1.7.5).
Download StarBEAST_posterior.species.trees (86.28 Mb)
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Title *BEAST MCC tree
Downloaded 14 times
Description Maximum clade credibility species tree inferred using the coalescent species tree software *BEAST v1.7.5.
Download StarBEAST_MCC.species.tre (37.70 Kb)
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Title MrBayes consensus tree
Downloaded 8 times
Description Majority rule consensus tree inferred using MrBayes. Node support values are posterior probabilities.
Download concatenated_by_gene.nex.con.tre (8.507 Kb)
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Title BEAST MCC tree
Downloaded 5 times
Description Maximum clade credibility tree inferred from analysis of concatenated dataset using BEAST v1.7.5.
Download dist_BEAST_combined.tre (237.9 Kb)
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When using this data, please cite the original publication:

Geneva AJ, Hilton J, Noll S, Glor RE (2015) Multilocus phylogenetic analyses of Hispaniolan and Bahamian trunk anoles (distichus species group). Molecular Phylogenetics and Evolution 87: 105-117. http://dx.doi.org/10.1016/j.ympev.2015.02.011

Additionally, please cite the Dryad data package:

Geneva AJ, Hilton J, Noll S, Glor RE (2015) Data from: Multilocus phylogenetic analyses of Hispaniolan and Bahamian trunk anoles (distichus species group). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.622h6
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