Data from: Fitness dynamics within a poplar hybrid zone: I. Prezygotic and postzygotic barriers impacting a native poplar hybrid stand.

Roe AD, MacQuarrie CJK, Gros-Louis M, Simpson JD, Lamarche J, Beardmore T, Thompson SL, Tanguay P, Isabel N

Date Published: April 3, 2014

DOI: http://dx.doi.org/10.5061/dryad.63fr7

 

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Title R code for analysis of fitness data
Downloaded 28 times
Description All R code associated with the manuscript are included. The file has been extensively commented as well.
Download All analysesNativePoplar_submit.R (88.60 Kb)
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Title Tree stand characteristics
Downloaded 6 times
Description This file contains the tree height, diameter at breast height, age classification, and genotype.
Download Stand_TreeData.csv (4.845 Kb)
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Title Biomass and yield fitness traits
Downloaded 8 times
Description This file contains the following biomass fitness traits: total catkin biomass, total seed biomass, 100 seed biomass, capsule biomass, stem biomass, and cotton biomass. It also contains the following yield measurements: capsules per catkin, seeds per capsule, and seeds per catkin.
Download Biomass.csv (24.08 Kb)
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Title Germination
Downloaded 8 times
Description This file contains two measures of germination success, as well as tree genotype class: germination success and number of abnormal germinants.
Download Germination.csv (4.118 Kb)
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Title Disease Susceptibility
Downloaded 7 times
Description This file contains the results of the controlled inoculation of trees with three fungal diseases: Melampsora larici-populina, M. medusae f.sp. deltoidae, and M. occidentalis. Susceptibility was measured by number of uredia by unit area.
Download Inoculations.csv (15.22 Kb)
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Title Structure file for genotype assignment
Downloaded 70 times
Description This file contains the recoded SNP data for input into Structure to estimate admixture in each individual.
Download BPSF_NativeOnly­_CompleteRef.xls (687.6 Kb)
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Title New Hybrid data file
Downloaded 4 times
Description The file contains the recoded genotype data for each tree for analysis in New Hybrids.
Download BPSF_NativeOnly_NH.txt (167.6 Kb)
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When using this data, please cite the original publication:

Roe AD, MacQuarrie CJK, Gros-Louis M, Simpson JD, Lamarche J, Beardmore T, Thompson SL, Tanguay P, Isabel N (2014) Fitness dynamics within a poplar hybrid zone: I. Prezygotic and postzygotic barriers impacting a native poplar hybrid stand. Ecology and Evolution 4(9): 1629–1647. http://dx.doi.org/10.1002/ece3.1029

Additionally, please cite the Dryad data package:

Roe AD, MacQuarrie CJK, Gros-Louis M, Simpson JD, Lamarche J, Beardmore T, Thompson SL, Tanguay P, Isabel N (2014) Data from: Fitness dynamics within a poplar hybrid zone: I. Prezygotic and postzygotic barriers impacting a native poplar hybrid stand. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.63fr7
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