Data from: Digital fragment analysis of short tandem repeats by high-throughput amplicon sequencing

Darby BJ, Erickson SF, Hervey SD, Ellis-Felege SN

Date Published: June 9, 2016

DOI: http://dx.doi.org/10.5061/dryad.68mc8

 

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Title digital Fragment Analysis Histograms
Downloaded 12 times
Description Histograms (in text files) of each microsatellite locus from Ondatra zibethicus (muskrat). These histograms were created with a custom Python script from Illumina MiSeq paired-end sequencing reads that were merged, quality filtered, and de-replicated. A file to map the sample to the specimen ID (and its sampling population) is in the ReadMe file.
Download OzHistograms.zip (803.5 Kb)
Download README.txt (3.794 Kb)
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Title digital Fragment Analysis Final Genotypes
Downloaded 14 times
Description Final microsatellite genotypes for each muskrat specimen, including muskrat ID, location, allele (0,1), and eleven micorsatellite loci. A text file that maps alleles to their sequence is in the ReadMe file.
Download finalGenotypes.txt (52.46 Kb)
Download README.txt (71.08 Kb)
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When using this data, please cite the original publication:

Darby BJ, Erickson SF, Hervey SD, Ellis-Felege SN (2016) Digital fragment analysis of short tandem repeats by high-throughput amplicon sequencing. Ecology and Evolution 6(13): 4502–4512. http://dx.doi.org/10.1002/ece3.2221

Additionally, please cite the Dryad data package:

Darby BJ, Erickson SF, Hervey SD, Ellis-Felege SN (2016) Data from: Digital fragment analysis of short tandem repeats by high-throughput amplicon sequencing. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.68mc8
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