Data from: A metabarcoding framework for facilitated survey of endolithic phototrophs with tufA

Sauvage T, Schmidt WE, Suda S, Fredericq S

Date Published: March 2, 2016

DOI: http://dx.doi.org/10.5061/dryad.6cj8h

 

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Title tufA database
Downloaded 29 times
Description TufA database for OTU annotation (sequences span the length of the metabarcode, i.e. the second half of tufA). Annotation consists of fields separated by '|' and include Genbank Accession, Category (Phototroph, Heterotroph), Domain, Phylum, Class, Order, Family and Genus.
Download tufADB_metabarcoding_BMC2016_accession_ca...us.fas (2.364 Mb)
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Title Annotated OTUs (Phototrophs)
Downloaded 21 times
Description Annotated Core OTUs clustered with UPARSE and SWARM. Annotation are found in fields separated by '|' and include OTU number, Domain, Phylum, Class, Order, Family and Genus.
Download OTUs_phototrophs_UPARSE_SWARM_BMC2016_num...us.fas (287.1 Kb)
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When using this data, please cite the original publication:

Sauvage T, Schmidt WE, Suda S, Fredericq S (2016) A metabarcoding framework for facilitated survey of endolithic phototrophs with tufA. BMC Ecology 16: 8. http://dx.doi.org/10.1186/s12898-016-0068-x

Additionally, please cite the Dryad data package:

Sauvage T, Schmidt WE, Suda S, Fredericq S (2016) Data from: A metabarcoding framework for facilitated survey of endolithic phototrophs with tufA. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.6cj8h
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