Data from: Comparative ecological transcriptomics and the contribution of gene expression to the evolutionary potential of a threatened fish

Brauer C, Unmack P, Beheregaray L

Date Published: November 8, 2017

DOI: https://doi.org/10.5061/dryad.6gh7b

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Title Nannoperca australis liver transcriptome
Downloaded 2 times
Description Nannoperca australis liver transcriptome assembled using Trinity based on RNAseq data from five individuals. Assembly contains 201,037 Trinity transcripts clustered into 96,717 Trinity "genes".
Download Trinity.fasta (299.5 Mb)
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Title ORF_counts
Downloaded 1 time
Description Raw counts data for 27,425 longest open reading frames
Download ORF_counts.matrix (2.754 Mb)
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Title TMM_ORF_counts
Downloaded 1 time
Description cross sample normalized counts for 27,425 ORFs
Download TMM_ORF_counts.matrix (4.506 Mb)
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Title SPP_trinotate_annotation_report
Downloaded 3 times
Description annotation information for Trinity.fasta assembly
Download SPP_trinotate_annotation_report.xls (177.8 Mb)
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When using this data, please cite the original publication:

Brauer CJ, Unmack PJ, Beheregaray LB (2017) Comparative ecological transcriptomics and the contribution of gene expression to the evolutionary potential of a threatened fish. Molecular Ecology, online in advance of print. https://doi.org/10.1111/mec.14432

Additionally, please cite the Dryad data package:

Brauer C, Unmack P, Beheregaray L (2017) Data from: Comparative ecological transcriptomics and the contribution of gene expression to the evolutionary potential of a threatened fish. Dryad Digital Repository. https://doi.org/10.5061/dryad.6gh7b
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