Data from: Inconsistent reproductive isolation revealed by interactions between Catostomus fish species

Mandeville E, Parchman T, Thompson K, Compton R, Gelwicks K, Song SJ, Buerkle CA

Date Published: November 8, 2017

DOI: https://doi.org/10.5061/dryad.6j205

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Title Input file for entropy analysis
Downloaded 1 time
Description Genotype likelihoods (simplified from VCF) at 11,221 SNPs for 2785 individual Catostomus fish. This file was used for analyses of hybridization.
Download entropy_common0.7.mpgl (232.9 Mb)
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Title artificial reference genome
Downloaded 1 time
Description This reference was made by completing a denovo assembly of a subset of the data using smng (see manuscript text) and all reads were assembled to this reference for variant calling.
Download split_sucker_ref_mm90.fasta (29.24 Mb)
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Title Full VCF file
Downloaded 1 time
Description All variant sites initially identified for analysis of hybridization. This VCF was produced using samtools and bcftools, and contains information for 2785 Catostomus individuals.
Download variants_0.7.vcf (4.051 Gb)
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When using this data, please cite the original publication:

Mandeville E, Parchman T, Thompson K, Compton R, Gelwicks K, Song SJ, Buerkle CA (2017) Inconsistent reproductive isolation revealed by interactions between Catostomus fish species. Evolution Letters, online in advance of print. https://doi.org/10.1002/evl3.29

Additionally, please cite the Dryad data package:

Mandeville E, Parchman T, Thompson K, Compton R, Gelwicks K, Song SJ, Buerkle CA (2017) Data from: Inconsistent reproductive isolation revealed by interactions between Catostomus fish species. Dryad Digital Repository. https://doi.org/10.5061/dryad.6j205
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