Data from: Adaptive phenotypic response to climate enabled by epigenetics in a K-strategy species, the fish Leucoraja ocellata (Rajidae)

Lighten J, Incarnato D, Ward BJ, van Oosterhout C, Bradbury I, Hanson M, Bentzen P

Date Published: September 27, 2016

DOI: http://dx.doi.org/10.5061/dryad.6mr8n

 

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Title Southern Gulf of St. Lawrence winter skate transcriptome
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Description Southern Gulf of St. Lawrence winter skate transcriptome. Assembled unannotated contigs from 454 sequencing reads.
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Title Scotian Shelf Winter Skate transcriptome
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Description Scotian Shelf Winter Skate transcriptome. Assembled unannotated contigs from 454 sequencing reads
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Title Scotian Shelf Winter Skate assembled consensus transcriptome contigs
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Description Scotian Shelf Winter Skate assembled consensus transcriptome contigs from 454 sequences
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Title Southern Gulf of St. Lawrence Winter Skate consesnus assembled transcriptome contigs
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Description Southern Gulf of St. Lawrence Winter Skate consesnus assembled transcriptome contigs from 454 sequencing
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Title Scotian_Shelf_Winter Skate_Longest_ORF
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Description Scotian_Shelf_Winter Skate_Longest_ORF nucleotide contigs from 454 sequence data
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Title Scotian_Shelf_Winter Skate_Longest_ORF_Translated
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Description Scotian_Shelf_Winter Skate_Longest_ORF_Translated from 454 sequence data
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Title sGSL_Winter Skate_Longest_ORF
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Description Southern Gulf of St. Lawrence_Winter Skate_Longest_ORF nucleotide contigs from 454 sequence data
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Title sGSL_Winter Skate_Longest_ORF_Translated
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Description sGSL_Winter Skate_Longest_ORF_Translated contigs from 454 sequencing data
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Title Scotial Shelf Winter Skate transcriptome Consensus Annotation
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Description Scotial Shelf Winter Skate transcriptome Consensus Annotation in a genebank-like format
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Title sGSL Winter Skate transcriptome Consensus Annotation
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Description Southern Gulf of St. Lawrence Winter Skate transcriptome Consensus Annotation in a Genbank-like format
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Title sGSL Winter Skate_Up-regulated_GO-Terms
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Description sGSL Winter Skate Gene Ontogeny Terms for up-regulated genes >1 Fold Change in RPKM
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Title sGSL Winter Skate_Down-regulated_GO-Terms
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Description sGSL Winter Skate Gene Ontogeny Terms for Down-regulated genes <-1 Fold Change in RPKM
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Title Scotian Shelf Winter Skate_Down-regulated_GO-Terms
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Description Scotian Shelf Winter Skate_Down-regulated_Geno Ontology-Terms <-1 fold change in sequencing RPKM
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Title Scotian Shelf Winter Skate_UP-regulated_GO-Terms
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Description Scotian Shelf Winter Skate_Down-regulated_Geno Ontology-Terms >1 fold change in sequencing RPKM
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When using this data, please cite the original publication:

Lighten J, Incarnato D, Ward BJ, van Oosterhout C, Bradbury I, Hanson M, Bentzen P (2016) Adaptive phenotypic response to climate enabled by epigenetics in a K-strategy species, the fish Leucoraja ocellata (Rajidae). Royal Society Open Science 3(10): 160299. http://dx.doi.org/10.1098/rsos.160299

Additionally, please cite the Dryad data package:

Lighten J, Incarnato D, Ward BJ, van Oosterhout C, Bradbury I, Hanson M, Bentzen P (2016) Data from: Adaptive phenotypic response to climate enabled by epigenetics in a K-strategy species, the fish Leucoraja ocellata (Rajidae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.6mr8n
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