Data from: Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd’s purse (Capsella bursa-pastoris)

Cornille A, Salcedo A, Kryvokhyzha D, Glémin S, Holm K, Wright S, Lascoux M

Date Published: November 24, 2015

DOI: http://dx.doi.org/10.5061/dryad.71f99

 

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Title Final GBS vcf dataset 4274 SNPs
Downloaded 52 times
Description Final GBS dataset used for population genetic inferences (.vcf) and its associated information for each sample used (X/Y, Country, cluster assignation, ID).
Download merged_filt_depth_75_200_ssduplicateindAN...re.vcf (35.13 Mb)
Download README.xlsx (47.06 Kb)
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Title Input ADMIXTURE files
Downloaded 24 times
Description ADMIXTURE input files used to infer popuation genetic structure using the 4274 SNPs
Download ADMIXTURE_INPUT_4274SNPS-def.zip (115.0 Kb)
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Title Genetic_AND_metric_distance_per_cluster
Downloaded 19 times
Description Pairwise Genetic and Matrix distances among localities within each genetic groups (EUR,ASI, ME) to test for IBD
Download Genetic_AND_metric_distance_per_cluster.zip (18.81 Kb)
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When using this data, please cite the original publication:

Cornille A, Salcedo A, Kryvokhyzha D, Glémin S, Holm K, Wright S, Lascoux M (2016) Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd’s purse (Capsella bursa-pastors). Molecular Ecology, 25(2): 616–629. http://dx.doi.org/10.1111/mec.13491

Additionally, please cite the Dryad data package:

Cornille A, Salcedo A, Kryvokhyzha D, Glémin S, Holm K, Wright S, Lascoux M (2015) Data from: Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd’s purse (Capsella bursa-pastoris). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.71f99
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