Data from: The case of the missing ancient fungal polyploids

Campbell MA, Ganley ARD, Gabaldón T, Cox MP

Date Published: July 18, 2016

DOI: http://dx.doi.org/10.5061/dryad.75dg8

 

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Title Alignment of genes from twenty-five fungi
Downloaded 1 time
Description Alignment of genes used to generate phylogenetic tree of twenty-five fungal taxa for modelling genome and chromosome evolution.
Download fungalAlignment.phy (249.3 Kb)
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Title Partitioning scheme for alignment file
Downloaded 2 times
Description A RAxML formatted partition file for the sequence alignment file.
Download fungalAlignmentPartition.txt (128 bytes)
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Title Genome size and inferred ancestral states from Mesquite
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Description Observed genome sizes and inferred ancestral states in a nexus file for use with Mesquite from twenty-five fungi.
Download MLTree.newick (1.179 Kb)
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Title Chromosome counts from fungi
Downloaded 4 times
Description Chromosome counts for the twenty-five fungi from the sequence alignment, for use with ChromEvol software.
Download counts.txt (845 bytes)
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When using this data, please cite the original publication:

Campbell MA, Ganley ARD, Gabaldón T, Cox MP (2016) The case of the missing ancient fungal polyploids. The American Naturalist 188(6): 602-614. http://dx.doi.org/10.1086/688763

Additionally, please cite the Dryad data package:

Campbell MA, Ganley ARD, Gabaldón T, Cox MP (2016) Data from: The case of the missing ancient fungal polyploids. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.75dg8
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