Data from: Rapid species-level identification of vaginal and oral lactobacilli using MALDI-TOF MS analysis and 16S rDNA sequencing

Anderson AC, Sanunu M, Schneider C, Clad A, Karygianni L, Hellwig E, Al-Ahmad APD

Date Published: January 5, 2015

DOI: http://dx.doi.org/10.5061/dryad.78vs2

 

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Title Phylogenetic tree based on the analysis of 16S rRNA gene sequences derived from oral and vaginal isolates
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Description 16S rDNA sequences were aligned using the SINA plugin (ARB software package) and distances were calculated using the neighbor-joining method with Jukes-Cantor correction. Reference sequences with accession numbers are in regular type, sample sequences of vaginal isolates in bold type and of oral isolates in bold/italics type. Sample strains are named according to their identification by 16S rDNA sequencing results. Bootstrap values (from 1000 replicates) greater than 40% are shown at the branch points. The bar indicates 5% sequence divergence.
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When using this data, please cite the original publication:

Anderson AC, Sanunu M, Schneider C, Clad A, Karygianni L, Hellwig E, Al-Ahmad APD (2014) Rapid species-level identification of vaginal and oral lactobacilli using MALDI-TOF MS analysis and 16S rDNA sequencing. BMC Microbiology 14: 312. http://dx.doi.org/10.1186/s12866-014-0312-5

Additionally, please cite the Dryad data package:

Anderson AC, Sanunu M, Schneider C, Clad A, Karygianni L, Hellwig E, Al-Ahmad APD (2014) Data from: Rapid species-level identification of vaginal and oral lactobacilli using MALDI-TOF MS analysis and 16S rDNA sequencing. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.78vs2
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