Data from: Root volume distribution of maturing perennial grasses revealed by correcting for minirhizotron surface effects

Black CK, Masters MD, LeBauer DS, Anderson-Teixeira KJ, DeLucia EH

Date Published: July 28, 2017

DOI: http://dx.doi.org/10.5061/dryad.79822

 

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Title README
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Title Raw image files
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Download Rootvolume_Black_etal_2017_images.zip (2.191 Gb)
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Title Image tracing data
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Description Full outputs from the manual image-tracing stage of the analysis. Includes the same data and log files included in the working directory's `rawdata/` folder, plus `.pat` files containing pixel-by-pixel coordinates of every root in each image traced in the experiment... but in an undocumented format :(
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Title Full Stan output
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Description Full output (~900 MB) from the Stan models, including saved HMC chains and a lot of diagnostic plots.
Download Rootvolume_Black_etal_2017_stan_output.zip (877.2 Mb)
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Title Data, analysis scripts, and results
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Description This is the main working directory for the project and it contains clean data, all scripts needed to reproduce the analysis, results, figures, notes from the development process, and assorted ancillary files. These files are also available on GitHub (https://github.com/infotroph/efrhizo); this zip file is a snapshot of that repository at revision 8783e81.
Download Rootvolume_Black_etal_2017_scripts_results.zip (43.31 Mb)
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When using this data, please cite the original publication:

Black CK, Masters MD, LeBauer DS, Anderson-Teixeira KJ, DeLucia EH (2017) Root volume distribution of maturing perennial grasses revealed by correcting for minirhizotron surface effects. Plant and Soil, online in advance of print. http://dx.doi.org/10.1007/s11104-017-3333-7

Additionally, please cite the Dryad data package:

Black CK, Masters MD, LeBauer DS, Anderson-Teixeira KJ, DeLucia EH (2017) Data from: Root volume distribution of maturing perennial grasses revealed by correcting for minirhizotron surface effects. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.79822
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