Data from: Three-dimensional self-gated cardiac MR imaging for the evaluation of myocardial infarction in mouse model on a 3T clinical MR system

Zhang X, Qiu B, Wei Z, Yan F, Shi C, Su S, Liu X, Ji JX, Xie G

Date Published: December 20, 2017

DOI: https://doi.org/10.5061/dryad.7b73j

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Title Original data set
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Description Please find the original MRI data in the MRI data file, and the histology image in the Histology file. All MRI data (referring to the .dat binary files) was from a 3 T clinical MR system (Tim Trio, Siemens, Erlangen, Germany) without using external ECG trigger and respiratory motion sensor. The data can be loaded, viewed, and analyzed with MATLAB 2013a (Mathworks Inc., Natick, MA, USA). After MR scan, all mice were re-anaesthetized and sacrificed by rapid excision of the heart. The heart was then rinsed in 0.9% NaCl, frozen and manually sectioned into 5-6 short-axis slices with thickness of ~1.5 mm from apex to base. The slices were incubated with 0.1% triphenyltetrazolium chloride (TTC) for 15 minutes, and photographed with a digital camera and prepared for further analysis (referring to the histology image).
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Title Data loading codes
Description The codes that could open/load the .dat files from Siemens MR scanners. You could use the 'demo' codes to load the files for further analysis.
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When using this data, please cite the original publication:

Zhang X, Qiu B, Wei Z, Yan F, Shi C, Su S, Liu X, Ji JX, Xie G (2017) Three-dimensional self-gated cardiac MR imaging for the evaluation of myocardial infarction in mouse model on a 3T clinical MR system. PLOS ONE 12(12): e0189286. https://doi.org/10.1371/journal.pone.0189286

Additionally, please cite the Dryad data package:

Zhang X, Qiu B, Wei Z, Yan F, Shi C, Su S, Liu X, Ji JX, Xie G (2017) Data from: Three-dimensional self-gated cardiac MR imaging for the evaluation of myocardial infarction in mouse model on a 3T clinical MR system. Dryad Digital Repository. https://doi.org/10.5061/dryad.7b73j
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