Data from: Testing the phylogenetic affinities of Southeast Asia’s rarest geckos: Flap-legged geckos (Luperosaurus), Flying geckos (Ptychozoon) and their relationship to the pan-Asian genus Gekko

 

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Title Luperosaurus Alignment File
Downloaded 70 times
Description Alignment files used in phylogenetic analyses. The character sets are provided in brackets at the end of the file.
Download Luperosaurus_Alignment.nex (70.37 Kb)
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Title Luperosaurus_joloensis_Phosducin
Downloaded 49 times
Description There is only a single tissue that we know of for this rare species. The tissue was degraded, and although we exhaustively tried to get more sequence data, we were left with just a short piece of nuclear data for the Phosducin gene. The file is formatted as a FASTA file. Genbank's new policy is to not accept sequences below 200bp. We therefore wanted to make this short read available via Dryad.
Download Luperosaurus_joloensis_Phosducin.txt (443 bytes)
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Title Bayesian Consensus Tree
Downloaded 50 times
Download Brown.etal.BayesianConsensus.tre (2.357 Kb)
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Title Likelihood Consensus Tree
Downloaded 42 times
Download Brown.etal.RAxML_Consensus.tre (3.195 Kb)
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When using this data, please cite the original publication:

Brown RM, Siler CD, Das I, Min PY (2012) Testing the phylogenetic affinities of Southeast Asia’s rarest geckos: Flap-legged geckos (Luperosaurus), Flying geckos (Ptychozoon) and their relationship to the pan-Asian genus Gekko. Molecular Phylogenetics and Evolution, 63(3): 915-921. http://dx.doi.org/10.1016/j.ympev.2012.02.019

Additionally, please cite the Dryad data package:

Brown RM, Siler CD, Das I, Min PY (2012) Data from: Testing the phylogenetic affinities of Southeast Asia’s rarest geckos: Flap-legged geckos (Luperosaurus), Flying geckos (Ptychozoon) and their relationship to the pan-Asian genus Gekko. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.7bn0fr99
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