Data from: The last bastion? X chromosome genotyping of Anopheles gambiae species pair males from a hybrid zone reveals complex recombination within the major candidate ‘genomic island of speciation’

Caputo B, Pichler V, Mancini E, Pombi M, Vicente JL, Dinis J, Steen K, Petrarca V, Rodrigues A, Pinto J, della Torre A, Weetman D

Date Published: October 25, 2016

DOI: http://dx.doi.org/10.5061/dryad.7ck7r.3

 

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Title Caputo et al 2016 Data S1
Description Information on the two Sequenom iPLEX® multiplexes used to genotype the X-centromeric region of An.gambiae and An.coluzzii specimens from Guinea Bissau and Burkina Faso as described in the paper. The two iPLEX assays were designed to genotype a total of 35 X-pericentromeric species-specific SNPs, yielding a density of 1 SNP per 0.12 Mb across the 4 Mb region targeted.
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Title Caputo et al 2016 Data S2
Downloaded 1 time
Description Genotyping results obtained for 61 males from Guinea Bissau (Safim) and 33 males from Burkina Faso which were Illumina -genotyped at 711 SNPs (43 on chromosome-X; 411 on chromosome-2; 257 on chromosome-3) as described in the paper.
Download Caputo et al 2016 Data S2.xlsx (323.8 Kb)
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When using this data, please cite the original publication:

Caputo B, Pichler V, Mancini E, Pombi M, Vicente JL, Dinis J, Steen K, Petrarca V, Rodrigues A, Pinto J, della Torre A, Weetman D (2016) The last bastion? X chromosome genotyping of Anopheles gambiae species pair males from a hybrid zone reveals complex recombination within the major candidate ‘genomic island of speciation’. Molecular Ecology 25(22): 5719-5731. http://dx.doi.org/10.1111/mec.13840

Additionally, please cite the Dryad data package:

Caputo B, Pichler V, Mancini E, Pombi M, Vicente JL, Dinis J, Steen K, Petrarca V, Rodrigues A, Pinto J, della Torre A, Weetman D (2016) Data from: The last bastion? X chromosome genotyping of Anopheles gambiae species pair males from a hybrid zone reveals complex recombination within the major candidate ‘genomic island of speciation’. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.7ck7r.3
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