Data from: The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record

Hsiang AY, Field DJ, Webster TH, Behlke ADB, Davis MB, Racicot RA, Gauthier JA

Date Published: May 22, 2015

DOI: http://dx.doi.org/10.5061/dryad.7ct1n

 

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Title Nexus file - phenotypic and ancestral state reconstruction characters
Downloaded 35 times
Description Phenotypic characters (766 total) represent latest revision of the Gauthier et al. (2012) AToL squamate matrix. Ancestral state reconstruction characters (11 total) collected based on literature searches (see Additional file 8). Matrix generated using Mesquite v. 2.75 (build 566).
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Title Nexus file - genetic data only
Downloaded 22 times
Description Genetic data compiled from NCBI GenBank database (see Additional file 9 for accession numbers) for 21 nuclear loci and one mitochondrial locus. Generated using TextWrangler v. 4.0.1 (build 3152).
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Title Nexus file - combined phenotypic and genetic characters
Downloaded 27 times
Description Dataset combining phenotypic characters (777 total) and genetic characters (18,320 total). Generated using TextWrangler v. 4.0.1 (build 3152).
Download combined_data.nxs (1.399 Mb)
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Title List of phenotypic characters and state names
Downloaded 27 times
Description Complete list of phenotypic characters updated from Gauthier et al.'s (2012) AToL squamate matrix.
Download character_states_names.docx (178.6 Kb)
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When using this data, please cite the original publication:

Hsiang AY, Field DJ, Webster TH, Behlke ADB, Davis MB, Racicot RA, Gauthier JA (2015) The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record. BMC Evolutionary Biology 15: 87. http://dx.doi.org/10.1186/s12862-015-0358-5

Additionally, please cite the Dryad data package:

Hsiang AY, Field DJ, Webster TH, Behlke ADB, Davis MB, Racicot RA, Gauthier JA (2015) Data from: The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.7ct1n
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