Data from: Hybrid asexuality as a primary postzygotic barrier between nascent species: on the interconnection between asexuality, hybridization and speciation

Janko K, Pačes J, Wilkinson-Herbots H, Costa R, Roslein J, Drozd P, Iakovenko N, Rídl J, Hroudová M, Kočí J, Reifová R, Šlechtová V, Choleva L

Date Published: September 8, 2017

DOI: https://doi.org/10.5061/dryad.7nt8f

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title RNAseq_1
Downloaded 4 times
Download G736HC302.RL5.sff.gz (653.3 Mb)
Details View File Details
Title RNAseq_2
Downloaded 3 times
Download G736HC302.RL8.sff.gz (435.0 Mb)
Details View File Details
Title RNAseq_3
Downloaded 3 times
Download IFMUJ8101.RL4.sff.gz (837.5 Mb)
Details View File Details
Title RNAseq_4
Downloaded 3 times
Download IFMUJ8101.RL5.sff.gz (644.4 Mb)
Details View File Details
Title RNAseq_5
Downloaded 2 times
Download IFMUJ8102.RL6.sff.gz (432.5 Mb)
Details View File Details
Title RNAseq_6
Downloaded 2 times
Download IFMUJ8102.RL10.sff.gz (695.8 Mb)
Details View File Details
Title RNAseq_7
Downloaded 3 times
Download IGASIBU01.RL5.sff.gz (1.087 Gb)
Details View File Details
Title SeqCap_1.zip
Downloaded 8 times
Description To extract the contents of netrimovane_SeqCap.zip, first concatenate the parts 001 through 020 -- On a Unix or Linux machine, you may use the "cat" command as $ cat netrimovane* > netrimovane_SeqCap.zip -- On a Windows machine, you may use the copy command, or a software such as HJSplit.
Download README.txt (1.325 Kb)
Download netrimovane_SeqCap.zip.001 (1.023 Gb)
Details View File Details
Title SeqCap_2.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.002 (1.023 Gb)
Details View File Details
Title SeqCap_3.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.003 (1.023 Gb)
Details View File Details
Title SeqCap_4.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.004 (1.023 Gb)
Details View File Details
Title SeqCap_5.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.005 (1.023 Gb)
Details View File Details
Title SeqCap_6.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.006 (1.023 Gb)
Details View File Details
Title SeqCap_7.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.007 (1.023 Gb)
Details View File Details
Title SeqCap_8.zip
Downloaded 2 times
Download netrimovane_SeqCap.zip.008 (1.023 Gb)
Details View File Details
Title SeqCap_9.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.009 (1.023 Gb)
Details View File Details
Title SeqCap_10.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.010 (1.023 Gb)
Details View File Details
Title SeqCap_11.zip
Downloaded 2 times
Download netrimovane_SeqCap.zip.011 (1.023 Gb)
Details View File Details
Title SeqCap_12.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.012 (1.023 Gb)
Details View File Details
Title SeqCap_13.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.013 (1.023 Gb)
Details View File Details
Title SeqCap_14.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.014 (1.023 Gb)
Details View File Details
Title SeqCap_15.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.015 (1.023 Gb)
Details View File Details
Title SeqCap_16.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.016 (1.023 Gb)
Details View File Details
Title SeqCap_17.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.017 (1.023 Gb)
Details View File Details
Title SeqCap_18.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.018 (1.023 Gb)
Details View File Details
Title SeqCap_19.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.019 (1.023 Gb)
Details View File Details
Title SeqCap_20.zip
Downloaded 3 times
Download netrimovane_SeqCap.zip.020 (82.40 Mb)
Details View File Details
Title Four reference samples for exome capture and SNP calling_1.zip
Downloaded 5 times
Description To extract the contents of 'Four reference samples for exome capture and SNP calling_1.zip', first concatenate the parts 001 through 006 -- On a Unix or Linux machine, you may use the "cat" command as $ cat Four* > Four_reference_samples_for_exome_capture_and_SNP_calling.zip -- On a Windows machine, you may use the copy command, or a software such as HJSplit.
Download Four reference samples for exome capture ...ip.001 (1.023 Gb)
Details View File Details
Title Four reference samples for exome capture and SNP calling_2.zip
Downloaded 3 times
Download Four reference samples for exome capture ...ip.002 (1.023 Gb)
Details View File Details
Title Four reference samples for exome capture and SNP calling_3.zip
Downloaded 2 times
Download Four reference samples for exome capture ...ip.003 (1.023 Gb)
Details View File Details
Title Four reference samples for exome capture and SNP calling_4.zip
Downloaded 4 times
Download Four reference samples for exome capture ...ip.004 (1.023 Gb)
Details View File Details
Title Four reference samples for exome capture and SNP calling_5.zip
Downloaded 3 times
Download Four reference samples for exome capture ...ip.005 (1.023 Gb)
Details View File Details
Title Four reference samples for exome capture and SNP calling_6.zip
Downloaded 3 times
Download Four reference samples for exome capture ...ip.006 (294.5 Mb)
Details View File Details
Title README_Description of original rna-seq and exome capture sequence data files
Downloaded 2 times
Download README_Description of original rna-seq an...es.txt (2.176 Kb)
Details View File Details
Title Table S1. Locality information from the Danube River hybrid zone
Downloaded 3 times
Download Table S1.docx (23.44 Kb)
Details View File Details
Title Appendix S2. SNP dataset
Downloaded 9 times
Description Every contig is represented by 18 lines, with two lines per individual in standard fasta format. Header line of each sequence contains: sampleID_genotype_contigID. Individuals' genotypes are indicated by letters as follows: LL, C. paludica; PP, C. pontica; EE, C. elongatoides; TT, C. taenia; NN, C. tanaitica. Variant positions are expressed using IUPAC notation and invariant positions are excluded.
Download Appendix S2.txt (2.033 Mb)
Details View File Details
Title Table S3. Summary of the coalescent models
Downloaded 5 times
Download Table S3.docx (32.32 Kb)
Details View File Details
Title Appendix S4. Summary of genetic divergences of fish species producing asexual hybrids
Downloaded 4 times
Download Appendix S4.docx (21.54 Kb)
Details View File Details
Title Table S5. Microsatellite allelic profiles of parents and their progeny within crossing experiments
Downloaded 5 times
Download Table S5.xlsx (24 Kb)
Details View File Details
Title Table S6. Oocyte analysis
Downloaded 3 times
Description For each female we indicate her biotype, origin, allozyme profile and the number of analyzed eggs.
Download Table S6.xlsx (76.40 Kb)
Details View File Details
Title Table S7. Microsatellite markers and cytochrome b gene haplotypes
Downloaded 7 times
Description This Table lists the alleles found in each sampled individual (specified by a respective ID number) on the basis of eight microsatellite markers. The cytochrome b gene haplotype is also specified.
Download Table S7.xlsx (21.82 Kb)
Details View File Details
Title Table S8. Summary statistics of microsatellite DNA analysis for three taxa based on eight loci
Downloaded 5 times
Download Table S8.xlsx (21.46 Kb)
Details View File Details
Title Table S9. SNP statistics
Downloaded 4 times
Description Summary statistics for within-species and between-species genetic distances.
Download Table S9.xlsx (10.56 Kb)
Details View File Details

When using this data, please cite the original publication:

Janko K, Pačes J, Wilkinson-Herbots H, Costa RJ, Roslein J, Drozd P, Iakovenko N, Rídl J, Hroudová M, Kočí J, Reifová R, Šlechtová V, Choleva L (2017) Hybrid asexuality as a primary postzygotic barrier between nascent species: on the interconnection between asexuality, hybridization and speciation. Molecular Ecology, online in advance of print. https://doi.org/10.1111/mec.14377

Additionally, please cite the Dryad data package:

Janko K, Pačes J, Wilkinson-Herbots H, Costa R, Roslein J, Drozd P, Iakovenko N, Rídl J, Hroudová M, Kočí J, Reifová R, Šlechtová V, Choleva L (2017) Data from: Hybrid asexuality as a primary postzygotic barrier between nascent species: on the interconnection between asexuality, hybridization and speciation. Dryad Digital Repository. https://doi.org/10.5061/dryad.7nt8f
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: