Data from: Inbreeding and selection shape genomic diversity in captive populations: implications for the conservation of endangered species

Willoughby JR, Ivy JA, Lacy RC, Doyle JM, DeWoody JA

Date Published: April 27, 2017

DOI: http://dx.doi.org/10.5061/dryad.7pt2m

 

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Title GBS-SNPs
Downloaded 15 times
Description SNP genotypes generated using genotyping by sequencing approaches. SNPs were used to characterize genomic diversity of captive Peromyscus leucopus populations. See readme for additional information.
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Title genome annotation
Downloaded 9 times
Description Annotation associated with genome sequencing of Peromyscus leucopus. Additional details are provided in the readme file, and raw reads are available via genbank.
Download README.txt (682 bytes)
Download genome_annotation.tar (556.7 Mb)
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Title Peromyscus leucopus genome assembly
Downloaded 8 times
Description Genome assembly that utilized 2 lanes of illumina 150bp, paired end reads (available at NCBI genbank accession number PRJNA375113).
Download pleucopus.fasta.zip (749.9 Mb)
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When using this data, please cite the original publication:

Willoughby JR, Ivy JA, Lacy RC, Doyle JM, DeWoody JA (2017) Inbreeding and selection shape genomic diversity in captive populations: Implications for the conservation of endangered species. PLOS ONE 12(4): e0175996. http://dx.doi.org/10.1371/journal.pone.0175996

Additionally, please cite the Dryad data package:

Willoughby JR, Ivy JA, Lacy RC, Doyle JM, DeWoody JA (2017) Data from: Inbreeding and selection shape genomic diversity in captive populations: implications for the conservation of endangered species. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.7pt2m
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