Data from: Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000

Li D, Zhang H, Song Q, Wang L, Liu S, Hong Y, Huang L, Song F

Date Published: June 18, 2015

DOI: http://dx.doi.org/10.5061/dryad.7qh1r

 

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Title Protein sequences used in phylogenetic tree analysis of Sl-MMPs with other plant MMPs
Downloaded 11 times
Description Phylogenetic tree was constructed by Neighbor-joining method using MEGA program. Plant MMPs used and their GenBank accessions are as follows: Arabidopsis thaliana At1-MMP (NP_193397), At2-MMP (NP_177174), At3-MMP (NP_173824), At4-MMP (NP_182030), At5-MMP (NP_176205), Glycine max Gm2-MMP (AAL27029), Gm-ACU24527 (ACU24527), Gm-Slti114 (ABW96008), Hordeum vulgare HvMMP1 (BAJ94792), HvMMP2 (BAJ93963), HvMMP3 (BAJ94176), HvMMP4 (BAJ90264), Medicago truncatula Mt1-MMP (CAA77093), Nicotiana tabacum NtMMP1 (ABF58910), Solanum lycopersicum Sl1-MMP (XP_010325488), Sl2-MMP (CCH68443), Sl3-MMP (NP_001266203), Sl4-MMP (XP_010320628), Sl5-MMP (XP_004248606), Zea mays ZmMMP1 (NP_001151749), ZmMMP2 (NP_001142095), Oryza sativa Os1-MMP (NP_001048075), Os2-MMP (NP_001057259), Os3-MMP (NP_001065361).
Download SlMMP Tree final.fasta (9.224 Kb)
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Title Phylogenetic tree analysis of Sl-MMPs with other plant MMPs.
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Description Phylogenetic tree was constructed by Neighbor-joining method using MEGA program.
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When using this data, please cite the original publication:

Li D, Zhang H, Song Q, Wang L, Liu S, Hong Y, Huang L, Song F (2015) Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. BMC Plant Biology 15: 143. http://dx.doi.org/10.1186/s12870-015-0536-z

Additionally, please cite the Dryad data package:

Li D, Zhang H, Song Q, Wang L, Liu S, Hong Y, Huang L, Song F (2015) Data from: Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.7qh1r
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