Data from: The impact of bottlenecks on microbial survival, adaptation and phenotypic switching in host-pathogen interactions

Moxon R, Kussell E

Date Published: September 14, 2017

DOI: https://doi.org/10.5061/dryad.80n7f

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Title Simulation code
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Description The file provided is a gzipped tar directory, containing the following items: (1) bottleneck.c: the simulation code is written in C, and needs the Gnu Scientific Library (GSL) in order to compile. The executable is called with a single parameter file, which is provided below as an example. The parameter file references several other input files, described in the code, which are also provided here as examples. (2) param_evolve_12_0.1_1e8: the parameter file. (3) several other files that are used to supply run parameters, as referenced in the code.
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At the request of the author, this item is embargoed until the associated publication appears.

When using this data, please cite the original publication:

Moxon R, Kussell E (2017) The impact of bottlenecks on microbial survival, adaptation and phenotypic switching in host-pathogen interactions. Evolution, online in advance of print. https://doi.org/10.1111/evo.13370

Additionally, please cite the Dryad data package:

Moxon R, Kussell E (2017) Data from: The impact of bottlenecks on microbial survival, adaptation and phenotypic switching in host-pathogen interactions. Dryad Digital Repository. https://doi.org/10.5061/dryad.80n7f
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