Data from: Evolution of toll-like receptors in the context of terrestrial ungulates and cetaceans diversification

Ishengoma E, Agaba M

Date Published: February 6, 2017

DOI: http://dx.doi.org/10.5061/dryad.80p28

 

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Title Control file for M8 model in PAML
Downloaded 9 times
Description Control file for the positive selection M8 PAML model used to analyze Toll-like receptors (Table 1)
Download M8.ctl (1.2 Kb)
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Title Control file for M7 model in PAML
Downloaded 6 times
Description Control file for the selection null (M7) PAML model used to analyze Toll-like receptors (Table 1).
Download M7.ctl (1.2 Kb)
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Title SLR raw data for TLR2
Downloaded 3 times
Description TLR2 raw results for site-wise likelihood analysis (Table 1).
Download TLR2_SLR_out.txt (83.59 Kb)
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Title SLR raw data for TLR3
Downloaded 6 times
Description TLR3 raw results for site-wise likelihood analysis (Table 1).
Download TLR3_SLR_out.txt (96.71 Kb)
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Title SLR raw data for TLR4
Downloaded 4 times
Description TLR4 raw results for site-wise likelihood analysis (Table 1).
Download TLR4_SLR_out.txt (89.30 Kb)
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Title SLR raw data for TLR5
Downloaded 5 times
Description TLR5 raw results for site-wise likelihood analysis (Table 1).
Download TLR5_SLR_out.txt (90.88 Kb)
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Title SLR raw data for TLR7
Downloaded 4 times
Description TLR7 raw results for site-wise likelihood analysis (Table 1).
Download TLR7_SLR_out.txt (113.1 Kb)
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Title SLR raw data for TLR9
Downloaded 10 times
Description TLR9 raw results for site-wise likelihood analysis (Table 1).
Download TLR9_SLR_out.txt (110.1 Kb)
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Title SLR raw data for TLR10
Downloaded 5 times
Description TLR10 raw results for site-wise likelihood analysis (Table 1).
Download TLR10_SLR_out.txt (86.59 Kb)
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Title TLRs alignments and trees
Description Raw sequence alignments and trees used to perform selection analyses in TLRs (Table 1, Table 2 and Figure 3)
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Title Giraffe and okapi sequence file
Downloaded 10 times
Description Raw sequences for giraffe and okapi TLRs used in the analyses.
Download Additional File 1.txt (37.90 Kb)
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When using this data, please cite the original publication:

Ishengoma E, Agaba M (2017) Evolution of toll-like receptors in the context of terrestrial ungulates and cetaceans diversification. BMC Evolutionary Biology 17: 54. http://dx.doi.org/10.1186/s12862-017-0901-7

Additionally, please cite the Dryad data package:

Ishengoma E, Agaba M (2017) Data from: Evolution of toll-like receptors in the context of terrestrial ungulates and cetaceans diversification. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.80p28
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