Data from: Multilocus analyses reveal little evidence for lineage wide adaptive evolution within major clades of soft pines (Pinus subgenus Strobus)

Eckert AJ, Bower AD, Jermstad KD, Wegrzyn JL, Knaus BJ, Syring JV, Neale DB

Date Published: September 6, 2013

DOI: http://dx.doi.org/10.5061/dryad.80ph2

 

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Title Eckert_et_al_pairwise_alignments
Description The file named Eckert_et_al_pairwise_alignments.zip contains 11 directories corresponding to pairwise alignments between loblolly pine and one of the eleven focal species. Within each directory are 192 fasta formatted alignment files (except for Pinus strobiformis which contains 191 alignment files). Alignment files are named by locus as defined in the manuscript associated with this Dryad entry. Within each alignment file are aligned sequences for the focal species and Pinus taeda (= loblolly pine). Sequences are identified to species using the following codes: Pial: Pinus albicaulis, Piar: Pinus aristata, Piay: Pinus ayacahuite, Pibf: Pinus balfouriana, Pifl: Pinus flexilis, Pila: Pinus lambertiana, Pilo: Pinus longaeva, Pimn: Pinus monticola, Pimo: Pinus monophylla, Pisb: Pinus strobiformis, Pist: Pinus strobus, Pita: Pinus taeda. Please note that a subset of 167 alignments was used in the final analysis. These can be identified using the online supplemental file available at the journal website.
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When using this data, please cite the original publication:

Eckert AJ, Bower AD, Jermstad KD, Wegrzyn JL, Knaus BJ, Syring JV, Neale DB (2013) Multilocus analyses reveal little evidence for lineage wide adaptive evolution within major clades of soft pines (Pinus subgenus Strobus). Molecular Ecology 22(22): 5635–5650. http://dx.doi.org/10.1111/mec.12514

Additionally, please cite the Dryad data package:

Eckert AJ, Bower AD, Jermstad KD, Wegrzyn JL, Knaus BJ, Syring JV, Neale DB (2013) Data from: Multilocus analyses reveal little evidence for lineage wide adaptive evolution within major clades of soft pines (Pinus subgenus Strobus). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.80ph2
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