Data from: pcadapt: an R package to perform genome scans for selection based on principal component analysis

Luu K, Bazin E, Blum MGB

Date Published: August 11, 2016

DOI: http://dx.doi.org/10.5061/dryad.8290n

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Simulated SNP data under a island and a divergence model.
Downloaded 31 times
Description The present archive contains 4 subfolders. Each subfolder contains a set of simulations relative to a specific model, which are listed in the filenames.txt. For each simulation, there are 5 files associated with: - the file without any extension contains the genotype matrix encoded with 0, 1 and 2. - the ped file. - the map file. - the file with the .gt extension contains the list of selected SNPs for the simulation. - the file with the .pop extension contains the population labels for each individual.
Download README.txt (514 bytes)
Download simulations.zip (14.53 Mb)
Details View File Details

When using this data, please cite the original publication:

Luu K, Bazin E, Blum MGB (2016) pcadapt : an R package to perform genome scans for selection based on principal component analysis. Molecular Ecology Resources 17(1): 67-77. http://dx.doi.org/10.1111/1755-0998.12592

Additionally, please cite the Dryad data package:

Luu K, Bazin E, Blum MGB (2016) Data from: pcadapt: an R package to perform genome scans for selection based on principal component analysis. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8290n
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: