Data from: The genomic consequences of adaptive divergence and reproductive isolation between species of manakins

Parchman TL, Gompert Z, Braun MJ, Brumfield RT, McDonald DB, Uy JAC, Zhang G, Jarvis ED, Schlinger BA, Buerkle CA

Date Published: December 12, 2012

DOI: http://dx.doi.org/10.5061/dryad.85078

 

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Title manacus_snpcnt
Downloaded 24 times
Description This file contains information on the number of reads representing each of two SNP states in each individual manakin across 59,100 loci. The file is organized by locus. For further details on how this file was generated, see the manuscript.
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Title manacus_assembly.bam
Downloaded 14 times
Description This file contains the entire assembly for the reference based assembly described in the manuscript.
Download manacus_parchman.bam (2.148 Gb)
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Title Mvitellinus_draft_genome
Downloaded 15 times
Description This file contains the first draft assembly of the M. vitellinus genome. This file will be embargoed until a paper containing a full description of this and 49 other avian genomes is published, most likely in early 2013.
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When using this data, please cite the original publication:

Parchman TL, Gompert Z, Braun MJ, Brumfield RT, McDonald DB, Uy JAC, Zhang G, Jarvis ED, Schlinger BA, Buerkle CA (2013) The genomic consequences of adaptive divergence and reproductive isolation between species of manakins. Molecular Ecology 22(12): 3304–3317. http://dx.doi.org/10.1111/mec.12201

Additionally, please cite the Dryad data package:

Parchman TL, Gompert Z, Braun MJ, Brumfield RT, McDonald DB, Uy JAC, Zhang G, Jarvis ED, Schlinger BA, Buerkle CA (2013) Data from: The genomic consequences of adaptive divergence and reproductive isolation between species of manakins. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.85078
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