Data from: Reduced genetic diversity and increased reproductive isolation follow population-level loss of larval dispersal in a marine gastropod

Ellingson RA, Krug PJ

Date Published: December 22, 2015

DOI: http://dx.doi.org/10.5061/dryad.87k2p.2

 

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Title 01, C_ocellifera master COI data
Downloaded 23 times
Description Master spreadsheet showing COI haplotype codes, NCBI accession numbers, sampling frequency per location, and specimen identifiers for slugs with a given haplotype
Download 01, C_ocellifera master COI data.xls (122.8 Kb)
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Title 02, Coce_COI_Evolution2015
Downloaded 14 times
Description Nexus file of collapsed COI haplotypes, with BayesPhylogenies command block
Download 02, Coce_COI_Evolution2015.nex (66.45 Kb)
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Title 03, Arlequin input file, Coce_13_pops
Downloaded 14 times
Description Arlequin input file for COI haplotypic data, each sampling site separated
Download 03, Arlequin input file, Coce_13_pops.arp (79.13 Kb)
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Title 04, Coce_COI_CaribP_run1
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Description BEAST input files for generating Bayesian skyline plot of pooled Caribbean planktotrophic demes
Download 04, Coce_COI_CaribP_run1.xml (65.33 Kb)
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Title 05, Coce_LAK_COI_run1
Downloaded 10 times
Description BEAST input files for generating Bayesian skyline plot of Lake Surprise population
Download 05, Coce_LAK_COI_run1.xml (15.97 Kb)
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Title 06, Coce_GEI_COI_run1
Downloaded 8 times
Description BEAST input files for generating Bayesian skyline plot of Geiger Beach population
Download 06, Coce_GEI_COI_run1_v2.xml (14.77 Kb)
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Title 07, Coce_LSS_COI_run1
Downloaded 8 times
Description BEAST input files for generating Bayesian skyline plot of Little San Salvador population
Download 07, Coce_LSS_COI_run1_v2.xml (18.38 Kb)
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Title 08, Coce_Plana_COI_run1
Downloaded 8 times
Description BEAST input files for generating Bayesian skyline plot of Plana Cays population
Download 08, Coce_Plana_COI_run1_v2.xml (15.38 Kb)
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Title 09, Coce_msats_14pops
Downloaded 18 times
Description Arlequin input file for microsatellite data, each sampling site separated
Download 09, Coce_msats_14pops.arp (10.91 Kb)
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Title 10, Coce_msats.str
Downloaded 8 times
Description Structure input file for microsatellite data
Download 10, Coce_msats.str (9.052 Kb)
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Title 11, 4runs_Coce_COI_post_burnin.nex
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Description Tree file combining post-burnin output from four Bayesian analyses of COI data
Download 11, 4runs_Coce_COI_post_burnin.nex.trees (3.195 Mb)
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When using this data, please cite the original publication:

Ellingson RA, Krug PJ (2015) Reduced genetic diversity and increased reproductive isolation follow population-level loss of larval dispersal in a marine gastropod. Evolution 70(1): 18–37. http://dx.doi.org/10.1111/evo.12830

Additionally, please cite the Dryad data package:

Ellingson RA, Krug PJ (2015) Data from: Reduced genetic diversity and increased reproductive isolation follow population-level loss of larval dispersal in a marine gastropod. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.87k2p.2
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