Data from: Molecular and iridescent feather reflectance data reveal recent genetic diversification and phenotypic differentiation in a cloud forest hummingbird

Ornelas JF, González C, Hernández-Baños BE, García-Moreno J

Date Published: January 27, 2016

DOI: http://dx.doi.org/10.5061/dryad.88589

 

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Title Ornelas_et al_IMa_AMETvsBLUE_mt+micros
Downloaded 25 times
Description Amethyst-throated (Sierra Madre Oriental and Trans-Mexican Volcanic Belt) versus blue-throated (Sierra Madre del Sur) populations of Lampornis amethystinus for mitochondrial markers (ND2 and cytochrome b) and microsatellites.
Download Ornelas_et al_IMa_AMETvsBLUE_mt+micros.txt (129.1 Kb)
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Title Ornelas_et al_IMa_SMOSvsTMVB_mt+micros
Downloaded 20 times
Description Amethyst-throated populations from the Sierra Madre Oriental versus amethyst-throated populations along the Trans-Mexican Volcanic Belt of Lampornis amethystinus for mitochondrial markers (ND2 and cytochrome b) and microsatellites.
Download Ornelas_et al_IMa_SMOSvsTMVB_mt+micros.txt (94.56 Kb)
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Title Ornelas_et al_IMa_WESTvsEAST_mt+micros
Downloaded 16 times
Description Amethyst-throated (incl. blue-throated) populations west of the Istmus of Tehuantepec versus amethyst-throated populations east of the Isthmus of Tehuantepec of Lampornis amethystinus for mitochondrial markers (ND2 and cytochrome b) and microsatellites.
Download Ornelas_et al_IMa_WESTvsEAST_mt+micros.txt (160.8 Kb)
Download README.rtf (1.881 Kb)
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Title Ornelas_et al_DIYABC_Genotypes_mito
Downloaded 27 times
Description Ornelas_et al_DIYABC_Genotypes_mito text-formatted DIYABC data file containing microsatellite genotypes and mitochondrial ND2 and cytochrome b concatenated sequences of populations of Lampornis amethystinus.
Download Ornelas_et al_DIYABC_Genotypes_mt.txt (125.9 Kb)
Download README.rtf (1.119 Kb)
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Title Ornelas_et al_DIYABC_models_header
Downloaded 21 times
Description Ornelas_et al_DIYABC_models_header text-formatted DIYABC reftableHeader file containing scenarios, priors and summary statistics used in the DIYABC analysis.
Download Ornelas_et al_DIYABC_models_header.txt (2.676 Kb)
Download README.rtf (1.119 Kb)
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Title Ornelas_et al_microsatellites_info
Downloaded 28 times
Description Microsatellite sizing for 126 samples of Lampornis amethystinus hummingbirds genotyped at eigth autosomal microsatellite loci previously designed for Campylopterus curvipennis (Cacu16-1 and Cacu17-2; Molecular Ecology Resources Primer Development Consortium et al. 2010; GenBank accession nos. GQ294539–GQ294550) and Selasphorus platycercus (HUMB2, HUMB3, HUMB9, HUMB10, HUMBB11 and HUMB15Oyler-McCance et al. 2011; HQ316946–HQ316955). Microsatellite sizing for each loci consists in 3 digits (e.g. 216 for L32 Malinche, Tlax. at loci Cacu 16-1).
Download Ornelas_et al_microsatellites_info.xls (72.19 Kb)
Download README.rtf (2.059 Kb)
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Title Ornelas_et al_MAXENT_Lampornis_amethystinus
Downloaded 13 times
Description Lampornis amethystinus_MAXENT_File: coordinates longitude and latitude of Lampornis amethystinus.
Download Ornelas_et al_MAXENT_Lampornis_amethystinus.csv (5.003 Kb)
Download README.rtf (852 bytes)
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When using this data, please cite the original publication:

Ornelas JF, González C, Hernández-Baños BE, García-Moreno J (2016) Molecular and iridescent feather reflectance data reveal recent genetic diversification and phenotypic differentiation in a cloud forest hummingbird. Ecology and Evolution 6(4): 1104–1127. http://dx.doi.org/10.1002/ece3.1950

Additionally, please cite the Dryad data package:

Ornelas JF, González C, Hernández-Baños BE, García-Moreno J (2016) Data from: Molecular and iridescent feather reflectance data reveal recent genetic diversification and phenotypic differentiation in a cloud forest hummingbird. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.88589
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