Data from: Soil fungal communities of grasslands are environmentally structured at a regional scale in the Alps

Pellissier L, Niculita-Hirzel H, Dubuis A, Pagni M, Guex N, Ndiribe C, Salamin N, Xennarios I, Goudet J, Sanders IR, Guisan A

Date Published: July 8, 2014

DOI: http://dx.doi.org/10.5061/dryad.88fm3

 

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Title Plant and environmental data
Description Plant species (frequency estimate) and environmental data in each of the 212 plots used in Pellissier et al. (In Review) Mol. Ecol.
Download plant_env_data.txt (146.7 Kb)
Download README.txt (2.438 Kb)
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Title ITS1 sequences from soil
Description ITS1 sequences coming from the soil of 204 plots have been obtained with the fungal universal primers ITS1F ITS2. The pyrosequencing outputs of six half 454 runs have been pooled in this unique fasta file. The number of each half of run (R meaning run and H meaning half) and of each MID used are mentionned in the name of each sequence. More information is provided on the information associated to these sequences in the "readme.txt" file
Download README.txt (290.3 Kb)
Download 454AlpsSoilFungi2009_reads.seq (484.5 Mb)
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Title Fungal OTUs distribution in plots
Description Fungal OTUs distribution in plots
Download fungal_OTUs_distribution_in_plots.txt (532.0 Kb)
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When using this data, please cite the original publication:

Pellissier L, Niculita-Hirzel H, Dubuis A, Pagni M, Guex N, Ndiribe C, Salamin N, Xennarios I, Goudet J, Sanders IR, Guisan A (2014) Soil fungal communities of grasslands are environmentally structured at a regional scale in the Alps. Molecular Ecology 23(17): 4274-4290. http://dx.doi.org/10.1111/mec.12854

Additionally, please cite the Dryad data package:

Pellissier L, Niculita-Hirzel H, Dubuis A, Pagni M, Guex N, Ndiribe C, Salamin N, Xennarios I, Goudet J, Sanders IR, Guisan A (2014) Data from: Soil fungal communities of grasslands are environmentally structured at a regional scale in the Alps. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.88fm3
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