Data from: Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages (Saxifraga sect. Porphyrion subsect. Oppositifoliae)

Winkler M, Tribsch A, Schneeweiss GM, Brodbeck S, Gugerli F, Holderegger R, Schönswetter P

Date Published: November 1, 2013

DOI: http://dx.doi.org/10.5061/dryad.8d820

 

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Title Plastid DNA sequences of Saxifraga oppositifolia s.l.
Downloaded 37 times
Description Combined alignment of plastid DNA sequences (psbA-trnH, trnT-trnF) of Saxifraga oppositifolia s.l. The alignment was created using BioEdit. First column: individual name containing population number and taxon abbreviation (aug = S. retusa subsp. augustana, bif = S. biflora subsp. biflora, ble = S. oppositifolia subsp. blepharophylla, opp = S. oppositifolia subsp. oppositifolia, par = S. oppositifolia subsp. paradoxa, rud = S. oppositifolia subsp. rudolphiana, ret = S. retusa subsp. retusa, spe = S. oppositifolia subsp. speciosa), second column: aligned sequences.
Download SaxOppSL_plastidSeqs_alignment.txt (265.8 Kb)
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Title AFLP matrix of Saxifraga oppositifolia s.l.
Downloaded 20 times
Description Manually scored AFLP matrix of Saxifraga oppositifolia s.l. using DAx (Van Mierlo Software Consultancy, Eindhoven) with non-reproducible and homogeneous fragments removed. AFLP data were generated following the procedure of Vos et al. (1995) with the modifications described by Schönswetter et al. (2009) using three primer combinations for selective PCR (fluorescent dyes in brackets) EcoRI (6-FAM)-ACA/MseI-CAC, EcoRI (VIC)-AGG/MseI-CTC, EcoRI (NED)-ACC/MseI-CAG. First column: individual name containing population number and taxon abbreviation (aug = S. retusa subsp. augustana, bif = S. biflora subsp. biflora, ble = S. oppositifolia subsp. blepharophylla, opp = S. oppositifolia subsp. oppositifolia, par = S. oppositifolia subsp. paradoxa, rud = S. oppositifolia subsp. rudolphiana, ret = S. retusa subsp. retusa, spe = S. oppositifolia subsp. speciosa), other columns: 0/1 matrix.
Download SaxOppSL_AFLP_matrix.txt (162.8 Kb)
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When using this data, please cite the original publication:

Winkler M, Tribsch A, Schneeweiss GM, Brodbeck S, Gugerli F, Holderegger R, Schönswetter P (2013) Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages (Saxifraga sect. Porphyrion subsect. Oppositifoliae). Botanical Journal of the Linnean Society 173(4): 622–636. http://dx.doi.org/10.1111/boj.12104

Additionally, please cite the Dryad data package:

Winkler M, Tribsch A, Schneeweiss GM, Brodbeck S, Gugerli F, Holderegger R, Schönswetter P (2013) Data from: Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages (Saxifraga sect. Porphyrion subsect. Oppositifoliae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8d820
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