Data from: Hybridization as a threat in climate relict Nuphar pumila (Nymphaeaceae)

Arrigo N, Bétrisey S, Graff L, Bilat J, Gerber E, Kozlowski G

Date Published: July 20, 2016

DOI: http://dx.doi.org/10.5061/dryad.8f0d4

 

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Title Nuphar_ABC_Arrigo2016
Downloaded 5 times
Description This folder contains: - SSR/ = empirical SSR dataset - data/ = ini files, hard coded - Qoutputs/ = quantinemo outputs - Qparams/ = quantinemo parameter files - Qstats/ = final summary stats - scripts/ = all needed scripts, look at README.jpg to get an idea how how the pipeline works - quantinemo = QuantiNemo V 1.6.0 (unreleased), can be downloaded at http://www.unil.ch/popgen/softwares/quantinemo/blaser_et_al_evolution.zip otherwise, contact Samuel Neuenschwander for getting a copy. Note that the pipeline must be started from scripts/ using the following command: perl ABC_loader.pl ncores nmax -ncore = number of parallel instances of quantiNemo you want to run -nmax = launch jobs until reaching nmax CPU load Dependencies: ## Linux OS, Ubuntu 10.04 ## Perl v5.10.1 threads; threads::shared; File::Basename; List::Util qw(shuffle); ## R >= 3.0.0 e1071 ## QuantiNemo: V 1.6.0
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When using this data, please cite the original publication:

Arrigo N, Bétrisey S, Graff L, Bilat J, Gerber E, Kozlowski G (2016) Hybridization as a threat in climate relict Nuphar pumila (Nymphaeaceae). Biodiversity and Conservation 25(10): 1863-1877. http://dx.doi.org/10.1007/s10531-016-1165-z

Additionally, please cite the Dryad data package:

Arrigo N, Bétrisey S, Graff L, Bilat J, Gerber E, Kozlowski G (2016) Data from: Hybridization as a threat in climate relict Nuphar pumila (Nymphaeaceae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8f0d4
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