Data from: Climate change and human colonization triggered habitat loss and fragmentation in Madagascar.

Salmona J, Heller R, Quéméré E, Chikhi L

Date Published: May 9, 2017

DOI: http://dx.doi.org/10.5061/dryad.8f45n

 

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Title Propithecus_perrieri_24loci_3pop
Downloaded 4 times
Description This file contains the microsatellite genotype data used in the current paper as well as in Salmona et al. 2015. The file is in .gtx format and can be opened and analyzed easily in Genetix, R, or with a common text editor. The file contains the data of 42 Propithecus perrieri individuals genotyped over 24 polymorphic microsatellites markers. The individuals are further classified in three "populations" that relates to sampling sites. Salmona et al. 2015 showed little differentiation between the three sampling sites, therefore the three "population" individuals can not be considered as belonging to the same population. A file containing the geographic coordinates of the samples is associated to this file. For further details on how the data was generated see Salmona, Jordi, et al. "Genetic Diversity, Population Size, and Conservation of the Critically Endangered Perrier’s Sifaka (Propithecus perrieri)." International Journal of Primatology 36.6 (2015): 1132-1153.
Download Supp_Mat_1_Pperr_24loci_3pop.gtx (8.435 Kb)
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Title Propithecus_perrieri_GPS_coordinates
Downloaded 4 times
Description This file contains the geographic coordinates of the 42 Propithecus perrieri individuals genotyped and studied in the current paper as well as in Salmona et al., 2015. The individuals ID correspond to those in the genetic data file. Salmona, J, et al. "Genetic Diversity, Population Size, and Conservation of the Critically Endangered Perrier’s Sifaka (Propithecus perrieri)." International Journal of Primatology 36.6 (2015): 1132-1153.
Download Supp_Mat_2_Pperr_gps_xy (1.24 Kb)
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Title Propithecus_tattersalli_230ind_13loc
Downloaded 6 times
Description This file contains the microsatellite genotype data used in the current paper as well as in Quéméré et al 2010, 2012. The file is in .gtx format and can be opened and analyzed easily in Genetix, R, or with a common text editor. The file contains the data of 230 Propithecus tatersalli individuals genotyped over 13 polymorphic microsatellites markers. The individuals are further classified in three "populations" that relates to the main genetic structure described in Quéméré et al 2010. A file containing the geographic coordinates of the samples is associated to this file. For further details on how the data was generated see Quemere, Erwan, et al. "Landscape genetics of an endangered lemur (Propithecus tattersalli) within its entire fragmented range." Molecular Ecology 19.8 (2010): 1606-1621.and Quéméré, Erwan, et al. "Genetic data suggest a natural prehuman origin of open habitats in northern Madagascar and question the deforestation narrative in this region." Proceedings of the National Academy of Sciences 109.32 (2012): 13028-13033.
Download Ptattersalli_230ind_13loc.gtx (24.31 Kb)
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Title Propithecus_tattersalli_GPS_coordinates
Downloaded 7 times
Description This file contains the geographic coordinates of the 230 Propithecus tattersalli individuals genotyped and studied in the current paper as well as in Quéméré et al., 2010, 2012. The individuals ID correspond to those in the genetic data file. For further details see Quemere, Erwan, et al. "Landscape genetics of an endangered lemur (Propithecus tattersalli) within its entire fragmented range." Molecular Ecology 19.8 (2010): 1606-1621.and Quéméré, Erwan, et al. "Genetic data suggest a natural prehuman origin of open habitats in northern Madagascar and question the deforestation narrative in this region." Proceedings of the National Academy of Sciences 109.32 (2012): 13028-13033.
Download Ptat_GIS.txt (16.57 Kb)
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When using this data, please cite the original publication:

Salmona J, Heller R, Quéméré E, Chikhi L (2017) Climate change and human colonization triggered habitat loss and fragmentation in Madagascar. Molecular Ecology, online in advance of print. http://dx.doi.org/10.1111/mec.14173

Additionally, please cite the Dryad data package:

Salmona J, Heller R, Quéméré E, Chikhi L (2017) Data from: Climate change and human colonization triggered habitat loss and fragmentation in Madagascar. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8f45n
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