Data from: Wing patterning gene redefines the mimetic history of Heliconius butterflies

 

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Title 2654eratoPHASED
Downloaded 30 times
Description DNA sequence data for a Proteasome 54kD subunit protein-coding sequence (referred to as 2654 in the manuscript) for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title 2654melpomenePHASED
Downloaded 29 times
Description DNA sequence data for a Proteasome 54kD subunit protein-coding sequence (referred to as 2654 in the manuscript) for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title bveseratoPHASED
Downloaded 27 times
Description DNA sequence data for a partial protein-coding sequence of the gene bves for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title bvesmelpPHASED
Downloaded 32 times
Description DNA sequence data for a partial protein-coding sequence of the gene bves for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title CATeratoPHASED
Downloaded 34 times
Description DNA sequence data for a partial protein-coding sequence of the gene Catalase (Cat) for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title CATmelpomenePHASED
Downloaded 38 times
Description DNA sequence data for a partial protein-coding sequence of the gene Catalase (Cat) for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title GPCReratoPHASED
Downloaded 30 times
Description DNA sequence data for a partial protein-coding sequence of the gene G protein coupled receptor for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title GPCRmelpomenePHASED
Downloaded 28 times
Description DNA sequence data for a partial protein-coding sequence of the gene G protein coupled receptor for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title kin_melpPHASED
Downloaded 24 times
Description DNA sequence data for the gene kinesin for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title kineratoPHASED
Downloaded 34 times
Description DNA sequence data for the gene kinesin for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title mterato
Downloaded 29 times
Description DNA sequence data for a sequenced fragment including mitochondrial COI-tRNALeu-COII for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing. Sequences can also be obtained in Genbank. Phylogenetic trees from neighbor-joining and Bayesian analyses are attached as a treeblock.
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Title mtmelpomene
Downloaded 29 times
Description DNA sequence data for a sequenced fragment including mitochondrial COI-tRNALeu-COII for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing. Sequences can also be obtained in Genbank. Phylogenetic trees from neighbor-joining and Bayesian analyses are attached as a treeblock.
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Title SUMOHeratoPHASED
Downloaded 25 times
Description DNA sequence data for the gene SUMO-1 activating enzyme (sae-1) for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title SUMOHmelpomenePHASED
Downloaded 27 times
Description DNA sequence data for the gene SUMO-1 activating enzyme (sae-1) for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title Suz12eratoPHASED
Downloaded 32 times
Description DNA sequence data for the gene Su(z)12 for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title Suz12melpomenePHASED
Downloaded 20 times
Description DNA sequence data for the gene Su(z)12 for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title VanGogheratoPHASED
Downloaded 28 times
Description DNA sequence data for the gene VanGogh for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title VanGoghmelpomenePHASED
Downloaded 23 times
Description DNA sequence data for the gene VanGogh for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. The file includes a treeblock containing a neighbor-joining tree constructed from this data using PAUP* and used in the study.
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Title optixeratoBayes
Downloaded 32 times
Description DNA sequence data for a 3'UTR plus a patial protein coding sequence of the gene optix for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. Identical haplotypes were consolidated into one haplotype sequence. The resulting Bayesian tree is attached as a treeblock.
Download optixeratoBayes.nex (69.03 Kb)
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Title optixmelpPHASEDHaplos
Downloaded 28 times
Description DNA sequence data for a 3'UTR plus a patial protein coding sequence of the gene optix for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. Identical haplotypes were consolidated into one haplotype sequence. The resulting Bayesian tree is attached as a treeblock.
Download optixmelpPHASEDHaplos.nex (43.42 Kb)
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Title optixeratoPHASEDNJ
Downloaded 30 times
Description DNA sequence data for a 3'UTR plus a patial protein coding sequence of the gene optix for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. A neighbor-joining tree inferred using PAUP* is attached as a treeblock.
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Title optixmelpPHASEDNJ
Downloaded 30 times
Description DNA sequence data for a 3'UTR plus a patial protein coding sequence of the gene optix for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms from double peaks in the chromatograms. Haplotypes were determined by analytically phasing the data across all sequences using the program PHASE. Inferred sequence before phasing can be obtained in Genbank. A neighbor-joining tree inferred using PAUP* is attached as a treeblock.
Download optixmelpPHASEDNJ.nex (107.9 Kb)
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When using this data, please cite the original publication:

Hines HM, Counterman BA, Papa R, Albuquerque de Moura P, Cardoso MZ, Linares M, Mallet J, Reed RD, Jiggins CD, Kronforst MR, McMillan WO (2011) Wing patterning gene redefines the mimetic history of Heliconius butterflies. Proceedings of the National Academy of Sciences of the United States of America 108(49): 19666-19671. http://dx.doi.org/10.1073/pnas.1110096108

Additionally, please cite the Dryad data package:

Hines HM, Counterman BA, Papa R, Albuquerque de Moura P, Cardoso MZ, Linares M, Mallet J, Reed RD, Jiggins CD, Kronforst MR, McMillan WO (2011) Data from: Wing patterning gene redefines the mimetic history of Heliconius butterflies. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8h154h65
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