Data from: SNP discovery and gene annotation in the surf clam Mesodesma donacium

Gallardo-Escárate C, Valenzuela-Muñoz V, Núñez-Acuña G, Haye P

Date Published: November 20, 2013

DOI: http://dx.doi.org/10.5061/dryad.8jd18

 

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Title ContigSNP_annotated_Md (613 seq)
Downloaded 7 times
Description 613 concensus sequences annotated with SNPs variants from Mesodesma donacium transcriptome.
Download ContigSNP_annotated_Md (613 seq).fa (706.9 Kb)
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Title Raw data of 454 transcriptome pyrosequencing from M. donacium
Downloaded 13 times
Description FASTA file with 180,159 ESTs.
Download Md.fa (69.85 Mb)
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Title Multi BLAST (613 sequences)_MmSNP
Downloaded 12 times
Description BLAST results for the 613 sequences with SNP annotations
Download Multi BLAST (613 sequences)_MmSNP.xlsx (113.9 Kb)
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Title GOAnalysis MmSNPs
Downloaded 33 times
Description GO analysis from contigs annotated with SNP variants.
Download GOAnalysis MmSNPs.xlsx (131.3 Kb)
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When using this data, please cite the original publication:

Gallardo-Escárate C, Valenzuela-Muñoz V, Núñez-Acuña G, Haye P (2015) SNP discovery and gene annotation in the surf clam Mesodesma donacium. Aquaculture Research 46(5): 1175-1187. http://dx.doi.org/10.1111/are.12273

Additionally, please cite the Dryad data package:

Gallardo-Escárate C, Valenzuela-Muñoz V, Núñez-Acuña G, Haye P (2013) Data from: SNP discovery and gene annotation in the surf clam Mesodesma donacium. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8jd18
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